Hb_179363_010

Information

Type -
Description -
Location Contig179363: 2-592
Sequence    

Annotation

kegg
ID rcu:RCOM_1579680
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.23)
nr
ID XP_012066189.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067LFF5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23766 PE=4 SV=1
Gene Ontology
ID GO:0005524
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_179363_010 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_008651_010 0.0599867918 - - cytochrome P450, putative [Ricinus communis]
3 Hb_112703_010 0.0613917707 - - PREDICTED: cytochrome P450 CYP72A219-like [Prunus mume]
4 Hb_000433_050 0.0616609792 - - PREDICTED: cell number regulator 1 isoform X1 [Vitis vinifera]
5 Hb_032071_010 0.0890896502 - - hypothetical protein EUGRSUZ_J02969 [Eucalyptus grandis]
6 Hb_002289_180 0.0957820278 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Nelumbo nucifera]
7 Hb_001515_040 0.1054755234 - - -
8 Hb_000025_490 0.1121494255 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
9 Hb_008725_220 0.1167438438 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
10 Hb_010223_010 0.1200174417 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
11 Hb_101437_010 0.1271922169 - - PREDICTED: protein P21-like [Jatropha curcas]
12 Hb_000836_180 0.1296989008 - - ferric reductase oxidase [Manihot esculenta]
13 Hb_000959_240 0.1338769963 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
14 Hb_010994_020 0.1347505015 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
15 Hb_000997_130 0.1380792204 - - DNA binding protein, putative [Ricinus communis]
16 Hb_004899_010 0.13994144 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
17 Hb_167186_010 0.1423890284 - - cation-transporting atpase plant, putative [Ricinus communis]
18 Hb_000164_160 0.1432457324 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
19 Hb_005054_330 0.1461012142 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
20 Hb_001153_250 0.1461974237 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 1A-like [Jatropha curcas]

Gene co-expression network

sample Hb_179363_010 Hb_179363_010 Hb_008651_010 Hb_008651_010 Hb_179363_010--Hb_008651_010 Hb_112703_010 Hb_112703_010 Hb_179363_010--Hb_112703_010 Hb_000433_050 Hb_000433_050 Hb_179363_010--Hb_000433_050 Hb_032071_010 Hb_032071_010 Hb_179363_010--Hb_032071_010 Hb_002289_180 Hb_002289_180 Hb_179363_010--Hb_002289_180 Hb_001515_040 Hb_001515_040 Hb_179363_010--Hb_001515_040 Hb_008651_010--Hb_112703_010 Hb_008651_010--Hb_002289_180 Hb_008651_010--Hb_032071_010 Hb_010223_010 Hb_010223_010 Hb_008651_010--Hb_010223_010 Hb_008651_010--Hb_000433_050 Hb_112703_010--Hb_002289_180 Hb_112703_010--Hb_032071_010 Hb_000997_130 Hb_000997_130 Hb_112703_010--Hb_000997_130 Hb_000164_160 Hb_000164_160 Hb_112703_010--Hb_000164_160 Hb_000433_050--Hb_001515_040 Hb_000025_490 Hb_000025_490 Hb_000433_050--Hb_000025_490 Hb_101437_010 Hb_101437_010 Hb_000433_050--Hb_101437_010 Hb_000433_050--Hb_112703_010 Hb_032071_010--Hb_002289_180 Hb_001846_030 Hb_001846_030 Hb_032071_010--Hb_001846_030 Hb_032071_010--Hb_000997_130 Hb_002289_180--Hb_000997_130 Hb_099188_010 Hb_099188_010 Hb_002289_180--Hb_099188_010 Hb_008637_020 Hb_008637_020 Hb_002289_180--Hb_008637_020 Hb_020367_010 Hb_020367_010 Hb_001515_040--Hb_020367_010 Hb_008725_220 Hb_008725_220 Hb_001515_040--Hb_008725_220 Hb_001515_040--Hb_000025_490 Hb_001515_040--Hb_101437_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.67194 4.54184 0.654884 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis