Hb_101437_010

Information

Type -
Description -
Location Contig101437: 668-1183
Sequence    

Annotation

kegg
ID vvi:100249610
description protein P21-like
nr
ID XP_012087215.1
description PREDICTED: protein P21-like [Jatropha curcas]
swissprot
ID P81370
description Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2
trembl
ID A0A067JRM3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20634 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_101437_010 0.0 - - PREDICTED: protein P21-like [Jatropha curcas]
2 Hb_008725_220 0.0776814694 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
3 Hb_000959_240 0.0824817672 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
4 Hb_001515_040 0.0919476624 - - -
5 Hb_000025_490 0.0965466394 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
6 Hb_020367_010 0.1032652795 - - hypothetical protein PRUPE_ppa004271mg [Prunus persica]
7 Hb_000433_050 0.1171348094 - - PREDICTED: cell number regulator 1 isoform X1 [Vitis vinifera]
8 Hb_179363_010 0.1271922169 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
9 Hb_004032_220 0.1280752115 - - Calmodulin, putative [Ricinus communis]
10 Hb_007858_020 0.1287639185 - - PREDICTED: probable protein phosphatase 2C 25 [Jatropha curcas]
11 Hb_167186_010 0.1300139598 - - cation-transporting atpase plant, putative [Ricinus communis]
12 Hb_005054_330 0.1310068584 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
13 Hb_001153_250 0.1368113125 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 1A-like [Jatropha curcas]
14 Hb_000836_310 0.1430766118 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 30 [Jatropha curcas]
15 Hb_074672_010 0.1443146323 - - receptor serine/threonine kinase, putative [Ricinus communis]
16 Hb_112703_010 0.1481312971 - - PREDICTED: cytochrome P450 CYP72A219-like [Prunus mume]
17 Hb_116352_010 0.149490779 - - kinase, putative [Ricinus communis]
18 Hb_003207_230 0.1519193088 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]
19 Hb_008651_010 0.1550781998 - - cytochrome P450, putative [Ricinus communis]
20 Hb_164146_010 0.1564401774 - - -

Gene co-expression network

sample Hb_101437_010 Hb_101437_010 Hb_008725_220 Hb_008725_220 Hb_101437_010--Hb_008725_220 Hb_000959_240 Hb_000959_240 Hb_101437_010--Hb_000959_240 Hb_001515_040 Hb_001515_040 Hb_101437_010--Hb_001515_040 Hb_000025_490 Hb_000025_490 Hb_101437_010--Hb_000025_490 Hb_020367_010 Hb_020367_010 Hb_101437_010--Hb_020367_010 Hb_000433_050 Hb_000433_050 Hb_101437_010--Hb_000433_050 Hb_008725_220--Hb_000959_240 Hb_008725_220--Hb_000025_490 Hb_005054_330 Hb_005054_330 Hb_008725_220--Hb_005054_330 Hb_167186_010 Hb_167186_010 Hb_008725_220--Hb_167186_010 Hb_008725_220--Hb_001515_040 Hb_007858_020 Hb_007858_020 Hb_000959_240--Hb_007858_020 Hb_000959_240--Hb_005054_330 Hb_000959_240--Hb_167186_010 Hb_000959_240--Hb_000025_490 Hb_001515_040--Hb_020367_010 Hb_001515_040--Hb_000025_490 Hb_179363_010 Hb_179363_010 Hb_001515_040--Hb_179363_010 Hb_001515_040--Hb_000433_050 Hb_002119_030 Hb_002119_030 Hb_000025_490--Hb_002119_030 Hb_000025_490--Hb_167186_010 Hb_116352_010 Hb_116352_010 Hb_020367_010--Hb_116352_010 Hb_048635_010 Hb_048635_010 Hb_020367_010--Hb_048635_010 Hb_002192_060 Hb_002192_060 Hb_020367_010--Hb_002192_060 Hb_000742_050 Hb_000742_050 Hb_020367_010--Hb_000742_050 Hb_000433_050--Hb_179363_010 Hb_008651_010 Hb_008651_010 Hb_000433_050--Hb_008651_010 Hb_000433_050--Hb_000025_490 Hb_112703_010 Hb_112703_010 Hb_000433_050--Hb_112703_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 81.1334 55.4862 5.08118 0 0.0969372
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.127509 0 0 0.0415285 1.88562

CAGE analysis