Hb_099188_010

Information

Type -
Description -
Location Contig99188: 3-713
Sequence    

Annotation

kegg
ID mdm:103426907
description probable receptor-like protein kinase At1g67000
nr
ID XP_012066189.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067LFF5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23766 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable receptor-like protein kinase at5g39020

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_099188_010 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_002548_030 0.0453943077 - - PREDICTED: uncharacterized protein LOC103343650 [Prunus mume]
3 Hb_128851_020 0.0454941583 - - ankyrin repeat-containing protein, putative [Ricinus communis]
4 Hb_000359_230 0.0470029218 - - PREDICTED: putative DNA-binding protein ESCAROLA [Prunus mume]
5 Hb_110356_010 0.0494153649 - - hypothetical protein JCGZ_21614 [Jatropha curcas]
6 Hb_001677_140 0.0644295419 - - PREDICTED: uncharacterized protein LOC102622520 isoform X1 [Citrus sinensis]
7 Hb_034581_010 0.0768932246 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
8 Hb_003207_230 0.0790067822 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]
9 Hb_001511_200 0.0796404171 - - Embryonic abundant protein, putative [Ricinus communis]
10 Hb_002289_180 0.0906192248 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Nelumbo nucifera]
11 Hb_008637_020 0.0908382308 - - conserved hypothetical protein [Ricinus communis]
12 Hb_010477_020 0.0986789146 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
13 Hb_124953_010 0.0998453823 - - hypothetical protein RCOM_1314600 [Ricinus communis]
14 Hb_002542_030 0.1018118114 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
15 Hb_010136_020 0.1052422507 - - stress-induced receptor-like kinase [Medicago truncatula]
16 Hb_036754_040 0.1074110647 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
17 Hb_002006_110 0.1082607905 transcription factor TF Family: LFY LEAFY-like protein [Pistacia chinensis]
18 Hb_112703_010 0.1117124348 - - PREDICTED: cytochrome P450 CYP72A219-like [Prunus mume]
19 Hb_047955_010 0.1134133931 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
20 Hb_000164_160 0.1135203873 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_099188_010 Hb_099188_010 Hb_002548_030 Hb_002548_030 Hb_099188_010--Hb_002548_030 Hb_128851_020 Hb_128851_020 Hb_099188_010--Hb_128851_020 Hb_000359_230 Hb_000359_230 Hb_099188_010--Hb_000359_230 Hb_110356_010 Hb_110356_010 Hb_099188_010--Hb_110356_010 Hb_001677_140 Hb_001677_140 Hb_099188_010--Hb_001677_140 Hb_034581_010 Hb_034581_010 Hb_099188_010--Hb_034581_010 Hb_002548_030--Hb_000359_230 Hb_002548_030--Hb_110356_010 Hb_002548_030--Hb_034581_010 Hb_002548_030--Hb_001677_140 Hb_002548_030--Hb_128851_020 Hb_001511_200 Hb_001511_200 Hb_128851_020--Hb_001511_200 Hb_128851_020--Hb_001677_140 Hb_128851_020--Hb_110356_010 Hb_128851_020--Hb_000359_230 Hb_000359_230--Hb_110356_010 Hb_000359_230--Hb_034581_010 Hb_000359_230--Hb_001677_140 Hb_110356_010--Hb_034581_010 Hb_110356_010--Hb_001677_140 Hb_010136_020 Hb_010136_020 Hb_001677_140--Hb_010136_020 Hb_002006_110 Hb_002006_110 Hb_001677_140--Hb_002006_110 Hb_036754_040 Hb_036754_040 Hb_001677_140--Hb_036754_040 Hb_001677_140--Hb_034581_010 Hb_034581_010--Hb_036754_040 Hb_034581_010--Hb_010136_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.853156 0.510044 0.253605 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis