Hb_010223_010

Information

Type -
Description -
Location Contig10223: 3849-5166
Sequence    

Annotation

kegg
ID rcu:RCOM_0703980
description Flavonol 3-sulfotransferase, putative (EC:2.8.2.4)
nr
ID XP_002524376.1
description Flavonol 3-sulfotransferase, putative [Ricinus communis]
swissprot
ID P52837
description Flavonol 4'-sulfotransferase OS=Flaveria chlorifolia PE=1 SV=1
trembl
ID B9SEF7
description Sulfotransferase OS=Ricinus communis GN=RCOM_0703980 PE=3 SV=1
Gene Ontology
ID GO:0008146
description flavonol 3-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01058: 4574-4794
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010223_010 0.0 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
2 Hb_107174_010 0.0690941216 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_000192_030 0.0992631426 - - PREDICTED: TATA-box-binding protein 2 isoform X1 [Setaria italica]
4 Hb_000997_130 0.1022730178 - - DNA binding protein, putative [Ricinus communis]
5 Hb_008651_010 0.1031284914 - - cytochrome P450, putative [Ricinus communis]
6 Hb_002999_150 0.1066725602 - - PREDICTED: probable calcium-binding protein CML45 [Jatropha curcas]
7 Hb_032071_010 0.110721188 - - hypothetical protein EUGRSUZ_J02969 [Eucalyptus grandis]
8 Hb_002289_180 0.1166209162 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Nelumbo nucifera]
9 Hb_179363_010 0.1200174417 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
10 Hb_012400_020 0.1212875277 - - Spotted leaf protein, putative [Ricinus communis]
11 Hb_010994_020 0.1244680971 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
12 Hb_112703_010 0.1249592195 - - PREDICTED: cytochrome P450 CYP72A219-like [Prunus mume]
13 Hb_007894_040 0.1254086256 - - PREDICTED: NEP1-interacting protein 1 isoform X1 [Jatropha curcas]
14 Hb_021142_030 0.1295208437 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
15 Hb_100395_010 0.1372711643 - - ankyrin repeat-containing protein, putative [Ricinus communis]
16 Hb_046610_010 0.1383261105 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_000953_180 0.1389626748 - - -
18 Hb_009692_030 0.1392205769 - - WRKY DNA-binding protein 70, putative isoform 2, partial [Theobroma cacao]
19 Hb_012146_010 0.1404789895 - - PREDICTED: uncharacterized protein LOC105111251 [Populus euphratica]
20 Hb_007747_070 0.1457038511 - - PREDICTED: casparian strip membrane protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_010223_010 Hb_010223_010 Hb_107174_010 Hb_107174_010 Hb_010223_010--Hb_107174_010 Hb_000192_030 Hb_000192_030 Hb_010223_010--Hb_000192_030 Hb_000997_130 Hb_000997_130 Hb_010223_010--Hb_000997_130 Hb_008651_010 Hb_008651_010 Hb_010223_010--Hb_008651_010 Hb_002999_150 Hb_002999_150 Hb_010223_010--Hb_002999_150 Hb_032071_010 Hb_032071_010 Hb_010223_010--Hb_032071_010 Hb_107174_010--Hb_002999_150 Hb_107174_010--Hb_000192_030 Hb_003207_220 Hb_003207_220 Hb_107174_010--Hb_003207_220 Hb_007894_040 Hb_007894_040 Hb_107174_010--Hb_007894_040 Hb_071654_010 Hb_071654_010 Hb_107174_010--Hb_071654_010 Hb_000953_180 Hb_000953_180 Hb_000192_030--Hb_000953_180 Hb_100395_010 Hb_100395_010 Hb_000192_030--Hb_100395_010 Hb_000365_110 Hb_000365_110 Hb_000192_030--Hb_000365_110 Hb_008948_070 Hb_008948_070 Hb_000192_030--Hb_008948_070 Hb_002289_180 Hb_002289_180 Hb_000997_130--Hb_002289_180 Hb_046610_010 Hb_046610_010 Hb_000997_130--Hb_046610_010 Hb_164577_010 Hb_164577_010 Hb_000997_130--Hb_164577_010 Hb_007546_010 Hb_007546_010 Hb_000997_130--Hb_007546_010 Hb_000164_160 Hb_000164_160 Hb_000997_130--Hb_000164_160 Hb_179363_010 Hb_179363_010 Hb_008651_010--Hb_179363_010 Hb_112703_010 Hb_112703_010 Hb_008651_010--Hb_112703_010 Hb_008651_010--Hb_002289_180 Hb_008651_010--Hb_032071_010 Hb_000433_050 Hb_000433_050 Hb_008651_010--Hb_000433_050 Hb_002999_150--Hb_003207_220 Hb_052764_120 Hb_052764_120 Hb_002999_150--Hb_052764_120 Hb_002267_010 Hb_002267_010 Hb_002999_150--Hb_002267_010 Hb_002999_150--Hb_071654_010 Hb_002999_150--Hb_007894_040 Hb_032071_010--Hb_002289_180 Hb_032071_010--Hb_112703_010 Hb_032071_010--Hb_179363_010 Hb_001846_030 Hb_001846_030 Hb_032071_010--Hb_001846_030 Hb_032071_010--Hb_000997_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.272585 0.445548 0.0845753 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis