Hb_002391_020

Information

Type transcription factor
Description TF Family: NAC
Location Contig2391: 25874-27143
Sequence    

Annotation

kegg
ID rcu:RCOM_0872210
description NAC domain-containing protein, putative
nr
ID XP_012065446.1
description PREDICTED: putative NAC domain-containing protein 94 [Jatropha curcas]
swissprot
ID Q9FIW5
description Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=3 SV=1
trembl
ID R4NHM3
description NAC transcription factor 034 OS=Jatropha curcas GN=JCGZ_22363 PE=4 SV=1
Gene Ontology
ID GO:0005634
description nac domain-containing protein 94

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_25046: 25922-26136 , PASA_asmbl_25047: 26355-27196
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002391_020 0.0 transcription factor TF Family: NAC PREDICTED: putative NAC domain-containing protein 94 [Jatropha curcas]
2 Hb_154466_010 0.0775593658 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
3 Hb_002010_020 0.0915839271 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Jatropha curcas]
4 Hb_158111_010 0.1030890512 - - S-locus-specific glycoprotein precursor, putative [Ricinus communis]
5 Hb_003119_030 0.1092350414 - - PREDICTED: classical arabinogalactan protein 1-like [Jatropha curcas]
6 Hb_002471_190 0.113976967 - - PREDICTED: U-box domain-containing protein 21-like [Jatropha curcas]
7 Hb_001619_140 0.1180229285 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
8 Hb_002615_010 0.1201124999 - - Uncharacterized protein TCM_040942 [Theobroma cacao]
9 Hb_074672_010 0.1296931503 - - receptor serine/threonine kinase, putative [Ricinus communis]
10 Hb_120011_010 0.1344403445 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
11 Hb_001635_230 0.1356130079 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
12 Hb_008202_020 0.1360490398 - - receptor serine/threonine kinase, putative [Ricinus communis]
13 Hb_000359_260 0.1418185828 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
14 Hb_006395_020 0.1462700421 - - hypothetical protein RCOM_0725510 [Ricinus communis]
15 Hb_017693_040 0.1467126542 - - tyrosine kinase family protein [Medicago truncatula]
16 Hb_001405_250 0.1486095898 - - PREDICTED: uncharacterized protein LOC105645451 [Jatropha curcas]
17 Hb_002107_110 0.1556506817 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 6 isoform X1 [Jatropha curcas]
18 Hb_000571_030 0.1562461731 - - ammonium transporter, putative [Ricinus communis]
19 Hb_012545_080 0.1585862766 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
20 Hb_067028_010 0.1605265488 - - BnaC03g72040D [Brassica napus]

Gene co-expression network

sample Hb_002391_020 Hb_002391_020 Hb_154466_010 Hb_154466_010 Hb_002391_020--Hb_154466_010 Hb_002010_020 Hb_002010_020 Hb_002391_020--Hb_002010_020 Hb_158111_010 Hb_158111_010 Hb_002391_020--Hb_158111_010 Hb_003119_030 Hb_003119_030 Hb_002391_020--Hb_003119_030 Hb_002471_190 Hb_002471_190 Hb_002391_020--Hb_002471_190 Hb_001619_140 Hb_001619_140 Hb_002391_020--Hb_001619_140 Hb_154466_010--Hb_002010_020 Hb_154466_010--Hb_002471_190 Hb_154466_010--Hb_001619_140 Hb_008202_020 Hb_008202_020 Hb_154466_010--Hb_008202_020 Hb_154466_010--Hb_158111_010 Hb_002010_020--Hb_008202_020 Hb_002010_020--Hb_002471_190 Hb_004899_360 Hb_004899_360 Hb_002010_020--Hb_004899_360 Hb_002010_020--Hb_001619_140 Hb_158111_010--Hb_002471_190 Hb_001635_230 Hb_001635_230 Hb_158111_010--Hb_001635_230 Hb_002615_010 Hb_002615_010 Hb_158111_010--Hb_002615_010 Hb_158111_010--Hb_002010_020 Hb_171974_010 Hb_171974_010 Hb_003119_030--Hb_171974_010 Hb_108802_010 Hb_108802_010 Hb_003119_030--Hb_108802_010 Hb_001405_250 Hb_001405_250 Hb_003119_030--Hb_001405_250 Hb_003119_030--Hb_154466_010 Hb_175087_010 Hb_175087_010 Hb_003119_030--Hb_175087_010 Hb_002471_190--Hb_001635_230 Hb_000087_200 Hb_000087_200 Hb_002471_190--Hb_000087_200 Hb_004109_240 Hb_004109_240 Hb_002471_190--Hb_004109_240 Hb_001619_140--Hb_008202_020 Hb_120011_010 Hb_120011_010 Hb_001619_140--Hb_120011_010 Hb_000571_030 Hb_000571_030 Hb_001619_140--Hb_000571_030 Hb_001619_140--Hb_004899_360 Hb_007858_020 Hb_007858_020 Hb_001619_140--Hb_007858_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.155303 44.7852 29.1296 5.5202 0 0.0390772
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0508027 0.0399561 0.220605 5.86517 2.20667

CAGE analysis