Hb_171974_010

Information

Type -
Description -
Location Contig171974: 552-2453
Sequence    

Annotation

kegg
ID rcu:RCOM_1158010
description aldo-keto reductase, putative (EC:1.1.1.21)
nr
ID XP_002529872.1
description aldo-keto reductase, putative [Ricinus communis]
swissprot
ID Q0PGJ6
description Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1
trembl
ID B9SV53
description Aldo-keto reductase, putative OS=Ricinus communis GN=RCOM_1158010 PE=4 SV=1
Gene Ontology
ID GO:0016491
description aldo-keto reductase family 4 member c9-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16114: 551-1266
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_171974_010 0.0 - - aldo-keto reductase, putative [Ricinus communis]
2 Hb_002119_030 0.1306325186 - - PREDICTED: U-box domain-containing protein 21-like [Jatropha curcas]
3 Hb_067028_010 0.1340315179 - - BnaC03g72040D [Brassica napus]
4 Hb_003119_030 0.1450108199 - - PREDICTED: classical arabinogalactan protein 1-like [Jatropha curcas]
5 Hb_000540_090 0.1498861157 - - PREDICTED: chitinase 2-like [Jatropha curcas]
6 Hb_001405_250 0.1534361476 - - PREDICTED: uncharacterized protein LOC105645451 [Jatropha curcas]
7 Hb_000025_490 0.1571539701 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
8 Hb_104641_010 0.1602972304 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
9 Hb_167186_010 0.1746493715 - - cation-transporting atpase plant, putative [Ricinus communis]
10 Hb_074672_010 0.1809452523 - - receptor serine/threonine kinase, putative [Ricinus communis]
11 Hb_002391_020 0.1815636141 transcription factor TF Family: NAC PREDICTED: putative NAC domain-containing protein 94 [Jatropha curcas]
12 Hb_000959_240 0.1832770009 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
13 Hb_008725_220 0.1893256594 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
14 Hb_101437_010 0.2007610652 - - PREDICTED: protein P21-like [Jatropha curcas]
15 Hb_158111_010 0.2012585422 - - S-locus-specific glycoprotein precursor, putative [Ricinus communis]
16 Hb_001999_170 0.2036215055 - - PREDICTED: uncharacterized protein LOC105630609 [Jatropha curcas]
17 Hb_000433_050 0.2040140896 - - PREDICTED: cell number regulator 1 isoform X1 [Vitis vinifera]
18 Hb_120011_010 0.2044287774 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
19 Hb_001361_010 0.2062444372 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
20 Hb_011622_010 0.2074546651 - - PREDICTED: transcription factor DIVARICATA-like [Jatropha curcas]

Gene co-expression network

sample Hb_171974_010 Hb_171974_010 Hb_002119_030 Hb_002119_030 Hb_171974_010--Hb_002119_030 Hb_067028_010 Hb_067028_010 Hb_171974_010--Hb_067028_010 Hb_003119_030 Hb_003119_030 Hb_171974_010--Hb_003119_030 Hb_000540_090 Hb_000540_090 Hb_171974_010--Hb_000540_090 Hb_001405_250 Hb_001405_250 Hb_171974_010--Hb_001405_250 Hb_000025_490 Hb_000025_490 Hb_171974_010--Hb_000025_490 Hb_002119_030--Hb_000025_490 Hb_002119_030--Hb_067028_010 Hb_167186_010 Hb_167186_010 Hb_002119_030--Hb_167186_010 Hb_008725_220 Hb_008725_220 Hb_002119_030--Hb_008725_220 Hb_000959_240 Hb_000959_240 Hb_002119_030--Hb_000959_240 Hb_005054_330 Hb_005054_330 Hb_002119_030--Hb_005054_330 Hb_000302_150 Hb_000302_150 Hb_067028_010--Hb_000302_150 Hb_001922_100 Hb_001922_100 Hb_067028_010--Hb_001922_100 Hb_006395_020 Hb_006395_020 Hb_067028_010--Hb_006395_020 Hb_067028_010--Hb_167186_010 Hb_067028_010--Hb_001405_250 Hb_002391_020 Hb_002391_020 Hb_003119_030--Hb_002391_020 Hb_108802_010 Hb_108802_010 Hb_003119_030--Hb_108802_010 Hb_003119_030--Hb_001405_250 Hb_154466_010 Hb_154466_010 Hb_003119_030--Hb_154466_010 Hb_175087_010 Hb_175087_010 Hb_003119_030--Hb_175087_010 Hb_000540_090--Hb_002119_030 Hb_000540_090--Hb_067028_010 Hb_000540_090--Hb_001922_100 Hb_003938_030 Hb_003938_030 Hb_000540_090--Hb_003938_030 Hb_000540_090--Hb_000025_490 Hb_001405_250--Hb_006395_020 Hb_074672_010 Hb_074672_010 Hb_001405_250--Hb_074672_010 Hb_001405_250--Hb_000025_490 Hb_001846_030 Hb_001846_030 Hb_001405_250--Hb_001846_030 Hb_001405_250--Hb_002119_030 Hb_000025_490--Hb_008725_220 Hb_000025_490--Hb_000959_240 Hb_001515_040 Hb_001515_040 Hb_000025_490--Hb_001515_040 Hb_000025_490--Hb_167186_010 Hb_101437_010 Hb_101437_010 Hb_000025_490--Hb_101437_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.469672 33.1841 26.5619 1.60474 0 0.025106
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 1.48951 0.651811 2.20184 0.206707

CAGE analysis