Hb_000302_150

Information

Type transcription factor
Description TF Family: WRKY
Location Contig302: 100122-101566
Sequence    

Annotation

kegg
ID rcu:RCOM_1581940
description hypothetical protein
nr
ID XP_002513635.1
description hypothetical protein RCOM_1581940 [Ricinus communis]
swissprot
ID Q9FLX8
description Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1
trembl
ID B9RIR6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1581940 PE=4 SV=1
Gene Ontology
ID GO:0003677
description probable wrky transcription factor 27

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000302_150 0.0 transcription factor TF Family: WRKY hypothetical protein RCOM_1581940 [Ricinus communis]
2 Hb_001922_100 0.048210123 - - S-type anion channel SLAH2 [Triticum urartu]
3 Hb_067028_010 0.0988068174 - - BnaC03g72040D [Brassica napus]
4 Hb_006395_020 0.1150438759 - - hypothetical protein RCOM_0725510 [Ricinus communis]
5 Hb_158111_010 0.1334192955 - - S-locus-specific glycoprotein precursor, putative [Ricinus communis]
6 Hb_002542_030 0.1374579517 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
7 Hb_002119_030 0.1429700722 - - PREDICTED: U-box domain-containing protein 21-like [Jatropha curcas]
8 Hb_001846_030 0.1434899197 - - PREDICTED: cytochrome P450 94A2-like [Jatropha curcas]
9 Hb_018043_010 0.1467513549 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]
10 Hb_012404_050 0.1559336459 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
11 Hb_167186_010 0.1570484284 - - cation-transporting atpase plant, putative [Ricinus communis]
12 Hb_000164_160 0.1662683581 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
13 Hb_001619_140 0.1665936645 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
14 Hb_022137_020 0.167335153 transcription factor TF Family: AP2 PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]
15 Hb_133845_010 0.1688330599 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
16 Hb_001141_200 0.1690542316 - - PREDICTED: LOW QUALITY PROTEIN: parafibromin [Prunus mume]
17 Hb_032071_010 0.1700631242 - - hypothetical protein EUGRSUZ_J02969 [Eucalyptus grandis]
18 Hb_017693_040 0.1720387321 - - tyrosine kinase family protein [Medicago truncatula]
19 Hb_000996_100 0.1720525586 - - Nucleotide binding, putative [Theobroma cacao]
20 Hb_008637_020 0.1731149133 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000302_150 Hb_000302_150 Hb_001922_100 Hb_001922_100 Hb_000302_150--Hb_001922_100 Hb_067028_010 Hb_067028_010 Hb_000302_150--Hb_067028_010 Hb_006395_020 Hb_006395_020 Hb_000302_150--Hb_006395_020 Hb_158111_010 Hb_158111_010 Hb_000302_150--Hb_158111_010 Hb_002542_030 Hb_002542_030 Hb_000302_150--Hb_002542_030 Hb_002119_030 Hb_002119_030 Hb_000302_150--Hb_002119_030 Hb_001922_100--Hb_067028_010 Hb_018043_010 Hb_018043_010 Hb_001922_100--Hb_018043_010 Hb_001922_100--Hb_006395_020 Hb_001922_100--Hb_158111_010 Hb_001922_100--Hb_002119_030 Hb_067028_010--Hb_002119_030 Hb_067028_010--Hb_006395_020 Hb_167186_010 Hb_167186_010 Hb_067028_010--Hb_167186_010 Hb_001405_250 Hb_001405_250 Hb_067028_010--Hb_001405_250 Hb_006395_020--Hb_001405_250 Hb_012404_050 Hb_012404_050 Hb_006395_020--Hb_012404_050 Hb_006395_020--Hb_167186_010 Hb_154466_010 Hb_154466_010 Hb_158111_010--Hb_154466_010 Hb_002391_020 Hb_002391_020 Hb_158111_010--Hb_002391_020 Hb_002471_190 Hb_002471_190 Hb_158111_010--Hb_002471_190 Hb_001635_230 Hb_001635_230 Hb_158111_010--Hb_001635_230 Hb_002615_010 Hb_002615_010 Hb_158111_010--Hb_002615_010 Hb_002010_020 Hb_002010_020 Hb_158111_010--Hb_002010_020 Hb_000164_160 Hb_000164_160 Hb_002542_030--Hb_000164_160 Hb_005054_330 Hb_005054_330 Hb_002542_030--Hb_005054_330 Hb_008637_020 Hb_008637_020 Hb_002542_030--Hb_008637_020 Hb_003207_230 Hb_003207_230 Hb_002542_030--Hb_003207_230 Hb_099188_010 Hb_099188_010 Hb_002542_030--Hb_099188_010 Hb_124953_010 Hb_124953_010 Hb_002542_030--Hb_124953_010 Hb_000025_490 Hb_000025_490 Hb_002119_030--Hb_000025_490 Hb_002119_030--Hb_167186_010 Hb_008725_220 Hb_008725_220 Hb_002119_030--Hb_008725_220 Hb_000959_240 Hb_000959_240 Hb_002119_030--Hb_000959_240 Hb_002119_030--Hb_005054_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.770815 0.518266 0.212102 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0298603 0 0.0716984 0

CAGE analysis