Hb_067028_010

Information

Type -
Description -
Location Contig67028: 1464-1747
Sequence    

Annotation

kegg
ID brp:103857734
description aldo-keto reductase family 4 member C9
nr
ID CDY59481.1
description BnaC03g72040D [Brassica napus]
swissprot
ID Q0PGJ6
description Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1
trembl
ID A0A078J829
description BnaC03g72040D protein OS=Brassica napus GN=BnaC03g72040D PE=4 SV=1
Gene Ontology
ID GO:0009507
description aldo-keto reductase family 4 member c9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_067028_010 0.0 - - BnaC03g72040D [Brassica napus]
2 Hb_002119_030 0.0911980169 - - PREDICTED: U-box domain-containing protein 21-like [Jatropha curcas]
3 Hb_000302_150 0.0988068174 transcription factor TF Family: WRKY hypothetical protein RCOM_1581940 [Ricinus communis]
4 Hb_001922_100 0.1076986973 - - S-type anion channel SLAH2 [Triticum urartu]
5 Hb_006395_020 0.1261756833 - - hypothetical protein RCOM_0725510 [Ricinus communis]
6 Hb_167186_010 0.1267840961 - - cation-transporting atpase plant, putative [Ricinus communis]
7 Hb_001405_250 0.1326384422 - - PREDICTED: uncharacterized protein LOC105645451 [Jatropha curcas]
8 Hb_171974_010 0.1340315179 - - aldo-keto reductase, putative [Ricinus communis]
9 Hb_158111_010 0.1468379379 - - S-locus-specific glycoprotein precursor, putative [Ricinus communis]
10 Hb_000025_490 0.1517648201 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
11 Hb_001846_030 0.1544163584 - - PREDICTED: cytochrome P450 94A2-like [Jatropha curcas]
12 Hb_002391_020 0.1605265488 transcription factor TF Family: NAC PREDICTED: putative NAC domain-containing protein 94 [Jatropha curcas]
13 Hb_005054_330 0.1611454085 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
14 Hb_000540_090 0.1632126317 - - PREDICTED: chitinase 2-like [Jatropha curcas]
15 Hb_002542_030 0.1667282573 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
16 Hb_032071_010 0.1683900596 - - hypothetical protein EUGRSUZ_J02969 [Eucalyptus grandis]
17 Hb_000959_240 0.1727515338 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
18 Hb_074672_010 0.1746417883 - - receptor serine/threonine kinase, putative [Ricinus communis]
19 Hb_008725_220 0.1753574226 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]
20 Hb_001619_140 0.175702456 - - trehalose-6-phosphate synthase, putative [Ricinus communis]

Gene co-expression network

sample Hb_067028_010 Hb_067028_010 Hb_002119_030 Hb_002119_030 Hb_067028_010--Hb_002119_030 Hb_000302_150 Hb_000302_150 Hb_067028_010--Hb_000302_150 Hb_001922_100 Hb_001922_100 Hb_067028_010--Hb_001922_100 Hb_006395_020 Hb_006395_020 Hb_067028_010--Hb_006395_020 Hb_167186_010 Hb_167186_010 Hb_067028_010--Hb_167186_010 Hb_001405_250 Hb_001405_250 Hb_067028_010--Hb_001405_250 Hb_000025_490 Hb_000025_490 Hb_002119_030--Hb_000025_490 Hb_002119_030--Hb_167186_010 Hb_008725_220 Hb_008725_220 Hb_002119_030--Hb_008725_220 Hb_000959_240 Hb_000959_240 Hb_002119_030--Hb_000959_240 Hb_005054_330 Hb_005054_330 Hb_002119_030--Hb_005054_330 Hb_000302_150--Hb_001922_100 Hb_000302_150--Hb_006395_020 Hb_158111_010 Hb_158111_010 Hb_000302_150--Hb_158111_010 Hb_002542_030 Hb_002542_030 Hb_000302_150--Hb_002542_030 Hb_000302_150--Hb_002119_030 Hb_018043_010 Hb_018043_010 Hb_001922_100--Hb_018043_010 Hb_001922_100--Hb_006395_020 Hb_001922_100--Hb_158111_010 Hb_001922_100--Hb_002119_030 Hb_006395_020--Hb_001405_250 Hb_012404_050 Hb_012404_050 Hb_006395_020--Hb_012404_050 Hb_006395_020--Hb_167186_010 Hb_167186_010--Hb_005054_330 Hb_007858_020 Hb_007858_020 Hb_167186_010--Hb_007858_020 Hb_167186_010--Hb_008725_220 Hb_167186_010--Hb_000959_240 Hb_167186_010--Hb_000025_490 Hb_074672_010 Hb_074672_010 Hb_001405_250--Hb_074672_010 Hb_001405_250--Hb_000025_490 Hb_001846_030 Hb_001846_030 Hb_001405_250--Hb_001846_030 Hb_001405_250--Hb_002119_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 590.829 402.467 90.5572 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 19.9613 8.96775 44.6554 0

CAGE analysis