Hb_108802_010

Information

Type -
Description -
Location Contig108802: 150-920
Sequence    

Annotation

kegg
ID pop:POPTR_0463s00200g
description hypothetical protein
nr
ID XP_012082146.1
description PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JM32
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27132 PE=3 SV=1
Gene Ontology
ID GO:0016772
description probable serine threonine-protein kinase at1g18390

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_108802_010 0.0 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
2 Hb_028841_020 0.1073883257 - - hypothetical protein CISIN_1g041345mg [Citrus sinensis]
3 Hb_001568_060 0.1339815277 - - PREDICTED: uncharacterized protein LOC105650728 [Jatropha curcas]
4 Hb_003119_030 0.1503410116 - - PREDICTED: classical arabinogalactan protein 1-like [Jatropha curcas]
5 Hb_025030_010 0.150694498 - - -
6 Hb_175087_010 0.1668202139 - - hypothetical protein POPTR_0011s16980g, partial [Populus trichocarpa]
7 Hb_001021_110 0.1669737743 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
8 Hb_002391_020 0.1757542406 transcription factor TF Family: NAC PREDICTED: putative NAC domain-containing protein 94 [Jatropha curcas]
9 Hb_000395_030 0.176481303 - - oligopeptide transporter, putative [Ricinus communis]
10 Hb_000175_250 0.1802389665 - - PREDICTED: cucumber peeling cupredoxin-like [Jatropha curcas]
11 Hb_051450_010 0.1845733964 - - conserved hypothetical protein [Ricinus communis]
12 Hb_004924_030 0.1955864269 - - -
13 Hb_007433_020 0.1967968098 - - hypothetical protein VITISV_005320 [Vitis vinifera]
14 Hb_039650_030 0.1982838658 - - hypothetical protein RCOM_2128750 [Ricinus communis]
15 Hb_004460_040 0.1991110776 - - -
16 Hb_168039_020 0.2011054089 - - -
17 Hb_004880_100 0.2013758965 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300-like [Glycine max]
18 Hb_012545_080 0.2041566306 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
19 Hb_004459_110 0.2043243603 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Populus euphratica]
20 Hb_000002_100 0.2056757253 - - phosphate transporter [Manihot esculenta]

Gene co-expression network

sample Hb_108802_010 Hb_108802_010 Hb_028841_020 Hb_028841_020 Hb_108802_010--Hb_028841_020 Hb_001568_060 Hb_001568_060 Hb_108802_010--Hb_001568_060 Hb_003119_030 Hb_003119_030 Hb_108802_010--Hb_003119_030 Hb_025030_010 Hb_025030_010 Hb_108802_010--Hb_025030_010 Hb_175087_010 Hb_175087_010 Hb_108802_010--Hb_175087_010 Hb_001021_110 Hb_001021_110 Hb_108802_010--Hb_001021_110 Hb_028841_020--Hb_001568_060 Hb_028841_020--Hb_025030_010 Hb_000175_250 Hb_000175_250 Hb_028841_020--Hb_000175_250 Hb_039650_030 Hb_039650_030 Hb_028841_020--Hb_039650_030 Hb_007433_020 Hb_007433_020 Hb_028841_020--Hb_007433_020 Hb_001568_060--Hb_025030_010 Hb_001568_060--Hb_007433_020 Hb_005882_020 Hb_005882_020 Hb_001568_060--Hb_005882_020 Hb_000322_120 Hb_000322_120 Hb_001568_060--Hb_000322_120 Hb_002391_020 Hb_002391_020 Hb_003119_030--Hb_002391_020 Hb_171974_010 Hb_171974_010 Hb_003119_030--Hb_171974_010 Hb_001405_250 Hb_001405_250 Hb_003119_030--Hb_001405_250 Hb_154466_010 Hb_154466_010 Hb_003119_030--Hb_154466_010 Hb_003119_030--Hb_175087_010 Hb_051450_010 Hb_051450_010 Hb_025030_010--Hb_051450_010 Hb_025030_010--Hb_001021_110 Hb_025030_010--Hb_007433_020 Hb_000510_350 Hb_000510_350 Hb_025030_010--Hb_000510_350 Hb_168039_020 Hb_168039_020 Hb_175087_010--Hb_168039_020 Hb_005545_090 Hb_005545_090 Hb_175087_010--Hb_005545_090 Hb_002290_100 Hb_002290_100 Hb_175087_010--Hb_002290_100 Hb_116352_010 Hb_116352_010 Hb_175087_010--Hb_116352_010 Hb_001300_120 Hb_001300_120 Hb_175087_010--Hb_001300_120 Hb_175087_010--Hb_028841_020 Hb_004785_120 Hb_004785_120 Hb_001021_110--Hb_004785_120 Hb_000523_060 Hb_000523_060 Hb_001021_110--Hb_000523_060 Hb_000996_200 Hb_000996_200 Hb_001021_110--Hb_000996_200 Hb_001021_110--Hb_005545_090 Hb_002481_070 Hb_002481_070 Hb_001021_110--Hb_002481_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.62019 1.61428 0.113367 0.0288795 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.100481 0.497032 0.222945

CAGE analysis