Hb_002481_070

Information

Type -
Description -
Location Contig2481: 58911-65789
Sequence    

Annotation

kegg
ID rcu:RCOM_0833840
description hypothetical protein
nr
ID KDP29625.1
description hypothetical protein JCGZ_18787 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KBJ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18787 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002481_070 0.0 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
2 Hb_000408_010 0.0683117131 - - PREDICTED: oxysterol-binding protein-related protein 4B [Jatropha curcas]
3 Hb_000523_060 0.0841040123 - - -
4 Hb_002787_100 0.0911367237 - - PREDICTED: uncharacterized protein LOC105637209 [Jatropha curcas]
5 Hb_005545_090 0.0997773204 - - -
6 Hb_001998_190 0.1163448523 transcription factor TF Family: CSD PREDICTED: uncharacterized protein LOC105636942 [Jatropha curcas]
7 Hb_000291_020 0.1223198352 - - hypothetical protein POPTR_0019s06080g [Populus trichocarpa]
8 Hb_019952_010 0.1324192656 - - -
9 Hb_000507_010 0.1341324851 - - hypothetical protein POPTR_0007s02420g [Populus trichocarpa]
10 Hb_001021_110 0.1419155158 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
11 Hb_000059_290 0.1431471688 - - pterin-4-alpha-carbinolamine dehydratase, putative [Ricinus communis]
12 Hb_003752_130 0.1461127628 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
13 Hb_000933_120 0.146196635 - - hypothetical protein L484_011925 [Morus notabilis]
14 Hb_000878_150 0.1492750068 - - Gibberellin receptor GID1, putative [Ricinus communis]
15 Hb_124207_010 0.1528836746 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_000203_030 0.1529712638 - - -
17 Hb_001300_120 0.1547937484 - - PREDICTED: stress response protein nst1-like [Jatropha curcas]
18 Hb_000856_330 0.1646025599 - - PREDICTED: protein QUIRKY isoform X1 [Cicer arietinum]
19 Hb_100873_040 0.1651857124 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
20 Hb_008111_020 0.16584816 - - Receptor like protein 6, putative [Theobroma cacao]

Gene co-expression network

sample Hb_002481_070 Hb_002481_070 Hb_000408_010 Hb_000408_010 Hb_002481_070--Hb_000408_010 Hb_000523_060 Hb_000523_060 Hb_002481_070--Hb_000523_060 Hb_002787_100 Hb_002787_100 Hb_002481_070--Hb_002787_100 Hb_005545_090 Hb_005545_090 Hb_002481_070--Hb_005545_090 Hb_001998_190 Hb_001998_190 Hb_002481_070--Hb_001998_190 Hb_000291_020 Hb_000291_020 Hb_002481_070--Hb_000291_020 Hb_000408_010--Hb_001998_190 Hb_000059_290 Hb_000059_290 Hb_000408_010--Hb_000059_290 Hb_000203_030 Hb_000203_030 Hb_000408_010--Hb_000203_030 Hb_000507_010 Hb_000507_010 Hb_000408_010--Hb_000507_010 Hb_019952_010 Hb_019952_010 Hb_000408_010--Hb_019952_010 Hb_000523_060--Hb_002787_100 Hb_000523_060--Hb_000291_020 Hb_124207_010 Hb_124207_010 Hb_000523_060--Hb_124207_010 Hb_000878_150 Hb_000878_150 Hb_000523_060--Hb_000878_150 Hb_000523_060--Hb_005545_090 Hb_002787_100--Hb_000291_020 Hb_002787_100--Hb_124207_010 Hb_012553_010 Hb_012553_010 Hb_002787_100--Hb_012553_010 Hb_002787_100--Hb_000878_150 Hb_001300_120 Hb_001300_120 Hb_005545_090--Hb_001300_120 Hb_000856_330 Hb_000856_330 Hb_005545_090--Hb_000856_330 Hb_005545_090--Hb_019952_010 Hb_005545_090--Hb_000507_010 Hb_001998_190--Hb_000507_010 Hb_000933_120 Hb_000933_120 Hb_001998_190--Hb_000933_120 Hb_001998_190--Hb_019952_010 Hb_001998_190--Hb_000203_030 Hb_001998_190--Hb_000059_290 Hb_000291_020--Hb_124207_010 Hb_000291_020--Hb_012553_010 Hb_166257_010 Hb_166257_010 Hb_000291_020--Hb_166257_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0262049 0.0117767 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0113384 0

CAGE analysis