Hb_000507_010

Information

Type -
Description -
Location Contig507: 15267-16792
Sequence    

Annotation

kegg
ID pop:POPTR_0007s02420g
description POPTRDRAFT_802598; hypothetical protein
nr
ID XP_002310455.1
description hypothetical protein POPTR_0007s02420g [Populus trichocarpa]
swissprot
ID Q15GI3
description Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1
trembl
ID B9HHE0
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s02420g PE=4 SV=1
Gene Ontology
ID GO:0047526
description isoeugenol synthase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000507_010 0.0 - - hypothetical protein POPTR_0007s02420g [Populus trichocarpa]
2 Hb_000933_120 0.0122041988 - - hypothetical protein L484_011925 [Morus notabilis]
3 Hb_019952_010 0.0127878078 - - -
4 Hb_001998_190 0.0481153238 transcription factor TF Family: CSD PREDICTED: uncharacterized protein LOC105636942 [Jatropha curcas]
5 Hb_000976_420 0.0612232366 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000856_330 0.0786289326 - - PREDICTED: protein QUIRKY isoform X1 [Cicer arietinum]
7 Hb_001300_120 0.0888446904 - - PREDICTED: stress response protein nst1-like [Jatropha curcas]
8 Hb_001246_150 0.1030637132 - - hypothetical protein MIMGU_mgv1a021562mg [Erythranthe guttata]
9 Hb_011671_200 0.104947459 - - -
10 Hb_000408_010 0.1050465969 - - PREDICTED: oxysterol-binding protein-related protein 4B [Jatropha curcas]
11 Hb_005211_110 0.1128618676 - - hypothetical protein POPTR_0010s13790g [Populus trichocarpa]
12 Hb_005545_090 0.1131177755 - - -
13 Hb_048308_010 0.1134024464 - - Peroxidase superfamily protein [Theobroma cacao]
14 Hb_000203_030 0.1217386028 - - -
15 Hb_002481_070 0.1341324851 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
16 Hb_000059_290 0.1414344226 - - pterin-4-alpha-carbinolamine dehydratase, putative [Ricinus communis]
17 Hb_100873_040 0.1736429065 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
18 Hb_005433_030 0.1765759445 transcription factor TF Family: MYB unnamed protein product [Vitis vinifera]
19 Hb_008764_010 0.1774720711 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 isoform X1 [Jatropha curcas]
20 Hb_004725_040 0.182353767 - - -

Gene co-expression network

sample Hb_000507_010 Hb_000507_010 Hb_000933_120 Hb_000933_120 Hb_000507_010--Hb_000933_120 Hb_019952_010 Hb_019952_010 Hb_000507_010--Hb_019952_010 Hb_001998_190 Hb_001998_190 Hb_000507_010--Hb_001998_190 Hb_000976_420 Hb_000976_420 Hb_000507_010--Hb_000976_420 Hb_000856_330 Hb_000856_330 Hb_000507_010--Hb_000856_330 Hb_001300_120 Hb_001300_120 Hb_000507_010--Hb_001300_120 Hb_000933_120--Hb_019952_010 Hb_000933_120--Hb_000976_420 Hb_000933_120--Hb_001998_190 Hb_000933_120--Hb_000856_330 Hb_000933_120--Hb_001300_120 Hb_019952_010--Hb_001998_190 Hb_019952_010--Hb_000976_420 Hb_019952_010--Hb_000856_330 Hb_019952_010--Hb_001300_120 Hb_000408_010 Hb_000408_010 Hb_001998_190--Hb_000408_010 Hb_000203_030 Hb_000203_030 Hb_001998_190--Hb_000203_030 Hb_000059_290 Hb_000059_290 Hb_001998_190--Hb_000059_290 Hb_011671_200 Hb_011671_200 Hb_000976_420--Hb_011671_200 Hb_000976_420--Hb_000856_330 Hb_000976_420--Hb_001300_120 Hb_000856_330--Hb_001300_120 Hb_000856_330--Hb_011671_200 Hb_005545_090 Hb_005545_090 Hb_001300_120--Hb_005545_090 Hb_001300_120--Hb_011671_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.052786 0.0474095 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0230878 0

CAGE analysis