Hb_000203_030

Information

Type -
Description -
Location Contig203: 36768-38387
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000203_030 0.0 - - -
2 Hb_000059_290 0.0316175088 - - pterin-4-alpha-carbinolamine dehydratase, putative [Ricinus communis]
3 Hb_001998_190 0.0765832784 transcription factor TF Family: CSD PREDICTED: uncharacterized protein LOC105636942 [Jatropha curcas]
4 Hb_000408_010 0.0849864993 - - PREDICTED: oxysterol-binding protein-related protein 4B [Jatropha curcas]
5 Hb_100873_040 0.1120097649 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
6 Hb_001246_150 0.1169545499 - - hypothetical protein MIMGU_mgv1a021562mg [Erythranthe guttata]
7 Hb_000507_010 0.1217386028 - - hypothetical protein POPTR_0007s02420g [Populus trichocarpa]
8 Hb_047923_010 0.1241208637 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
9 Hb_048308_010 0.1241452891 - - Peroxidase superfamily protein [Theobroma cacao]
10 Hb_005211_110 0.1246950067 - - hypothetical protein POPTR_0010s13790g [Populus trichocarpa]
11 Hb_000933_120 0.1247715519 - - hypothetical protein L484_011925 [Morus notabilis]
12 Hb_019952_010 0.1331418903 - - -
13 Hb_008111_020 0.1414869233 - - Receptor like protein 6, putative [Theobroma cacao]
14 Hb_000613_270 0.1452978329 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
15 Hb_023774_010 0.1500164269 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
16 Hb_002481_070 0.1529712638 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
17 Hb_000343_280 0.1622187113 - - hypothetical protein JCGZ_24094 [Jatropha curcas]
18 Hb_000976_420 0.1651346132 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003086_180 0.1670922592 - - PREDICTED: RING-H2 finger protein ATL70-like [Pyrus x bretschneideri]
20 Hb_005306_040 0.172479646 - - calmodulin binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000203_030 Hb_000203_030 Hb_000059_290 Hb_000059_290 Hb_000203_030--Hb_000059_290 Hb_001998_190 Hb_001998_190 Hb_000203_030--Hb_001998_190 Hb_000408_010 Hb_000408_010 Hb_000203_030--Hb_000408_010 Hb_100873_040 Hb_100873_040 Hb_000203_030--Hb_100873_040 Hb_001246_150 Hb_001246_150 Hb_000203_030--Hb_001246_150 Hb_000507_010 Hb_000507_010 Hb_000203_030--Hb_000507_010 Hb_000059_290--Hb_000408_010 Hb_000059_290--Hb_001998_190 Hb_047923_010 Hb_047923_010 Hb_000059_290--Hb_047923_010 Hb_000059_290--Hb_100873_040 Hb_008111_020 Hb_008111_020 Hb_000059_290--Hb_008111_020 Hb_001998_190--Hb_000507_010 Hb_000933_120 Hb_000933_120 Hb_001998_190--Hb_000933_120 Hb_019952_010 Hb_019952_010 Hb_001998_190--Hb_019952_010 Hb_001998_190--Hb_000408_010 Hb_002481_070 Hb_002481_070 Hb_000408_010--Hb_002481_070 Hb_000408_010--Hb_000507_010 Hb_000408_010--Hb_019952_010 Hb_100873_040--Hb_000408_010 Hb_100873_040--Hb_001998_190 Hb_000343_280 Hb_000343_280 Hb_100873_040--Hb_000343_280 Hb_005306_040 Hb_005306_040 Hb_100873_040--Hb_005306_040 Hb_005211_110 Hb_005211_110 Hb_001246_150--Hb_005211_110 Hb_048308_010 Hb_048308_010 Hb_001246_150--Hb_048308_010 Hb_008764_010 Hb_008764_010 Hb_001246_150--Hb_008764_010 Hb_001246_150--Hb_000933_120 Hb_000976_420 Hb_000976_420 Hb_001246_150--Hb_000976_420 Hb_001246_150--Hb_000507_010 Hb_000507_010--Hb_000933_120 Hb_000507_010--Hb_019952_010 Hb_000507_010--Hb_000976_420 Hb_000856_330 Hb_000856_330 Hb_000507_010--Hb_000856_330 Hb_001300_120 Hb_001300_120 Hb_000507_010--Hb_001300_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.031525 0.0300589 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0276935 0

CAGE analysis