Hb_100873_040

Information

Type -
Description -
Location Contig100873: 37962-40134
Sequence    

Annotation

kegg
ID rcu:RCOM_0574930
description receptor serine/threonine kinase, putative
nr
ID XP_012066187.1
description PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
swissprot
ID Q9FID6
description Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1
trembl
ID A0A067LE94
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23767 PE=3 SV=1
Gene Ontology
ID GO:0000166
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_100873_040 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
2 Hb_000059_290 0.1047050678 - - pterin-4-alpha-carbinolamine dehydratase, putative [Ricinus communis]
3 Hb_000203_030 0.1120097649 - - -
4 Hb_000408_010 0.1222642629 - - PREDICTED: oxysterol-binding protein-related protein 4B [Jatropha curcas]
5 Hb_001998_190 0.1384501774 transcription factor TF Family: CSD PREDICTED: uncharacterized protein LOC105636942 [Jatropha curcas]
6 Hb_000343_280 0.1409863861 - - hypothetical protein JCGZ_24094 [Jatropha curcas]
7 Hb_005306_040 0.1438601181 - - calmodulin binding protein, putative [Ricinus communis]
8 Hb_008111_020 0.145165722 - - Receptor like protein 6, putative [Theobroma cacao]
9 Hb_047923_010 0.1469501326 - - PREDICTED: uncharacterized protein LOC101496717 [Cicer arietinum]
10 Hb_002481_070 0.1651857124 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
11 Hb_000613_270 0.1675295287 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
12 Hb_023774_010 0.1711157264 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
13 Hb_000507_010 0.1736429065 - - hypothetical protein POPTR_0007s02420g [Populus trichocarpa]
14 Hb_003752_130 0.1742566346 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
15 Hb_000933_120 0.178644455 - - hypothetical protein L484_011925 [Morus notabilis]
16 Hb_019952_010 0.1811756017 - - -
17 Hb_002157_180 0.1874910983 - - separase, putative [Ricinus communis]
18 Hb_001246_150 0.1875748641 - - hypothetical protein MIMGU_mgv1a021562mg [Erythranthe guttata]
19 Hb_003086_180 0.1901458963 - - PREDICTED: RING-H2 finger protein ATL70-like [Pyrus x bretschneideri]
20 Hb_048308_010 0.1941371667 - - Peroxidase superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_100873_040 Hb_100873_040 Hb_000059_290 Hb_000059_290 Hb_100873_040--Hb_000059_290 Hb_000203_030 Hb_000203_030 Hb_100873_040--Hb_000203_030 Hb_000408_010 Hb_000408_010 Hb_100873_040--Hb_000408_010 Hb_001998_190 Hb_001998_190 Hb_100873_040--Hb_001998_190 Hb_000343_280 Hb_000343_280 Hb_100873_040--Hb_000343_280 Hb_005306_040 Hb_005306_040 Hb_100873_040--Hb_005306_040 Hb_000059_290--Hb_000203_030 Hb_000059_290--Hb_000408_010 Hb_000059_290--Hb_001998_190 Hb_047923_010 Hb_047923_010 Hb_000059_290--Hb_047923_010 Hb_008111_020 Hb_008111_020 Hb_000059_290--Hb_008111_020 Hb_000203_030--Hb_001998_190 Hb_000203_030--Hb_000408_010 Hb_001246_150 Hb_001246_150 Hb_000203_030--Hb_001246_150 Hb_000507_010 Hb_000507_010 Hb_000203_030--Hb_000507_010 Hb_000408_010--Hb_001998_190 Hb_002481_070 Hb_002481_070 Hb_000408_010--Hb_002481_070 Hb_000408_010--Hb_000507_010 Hb_019952_010 Hb_019952_010 Hb_000408_010--Hb_019952_010 Hb_001998_190--Hb_000507_010 Hb_000933_120 Hb_000933_120 Hb_001998_190--Hb_000933_120 Hb_001998_190--Hb_019952_010 Hb_000343_280--Hb_005306_040 Hb_000343_280--Hb_008111_020 Hb_000512_080 Hb_000512_080 Hb_000343_280--Hb_000512_080 Hb_000343_280--Hb_000059_290 Hb_000343_280--Hb_000408_010 Hb_000720_110 Hb_000720_110 Hb_005306_040--Hb_000720_110 Hb_001481_030 Hb_001481_030 Hb_005306_040--Hb_001481_030 Hb_055147_010 Hb_055147_010 Hb_005306_040--Hb_055147_010 Hb_000692_180 Hb_000692_180 Hb_005306_040--Hb_000692_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.505202 0.383085 0.00824725 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0204701 0 0.432194 0

CAGE analysis