Hb_001481_030

Information

Type -
Description -
Location Contig1481: 37533-38585
Sequence    

Annotation

kegg
ID rcu:RCOM_1432140
description serine-threonine protein kinase, plant-type, putative
nr
ID XP_002512394.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q7X8C5
description Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1
trembl
ID B9RF75
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1432140 PE=4 SV=1
Gene Ontology
ID GO:0004672
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001481_030 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_000720_110 0.1118600789 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
3 Hb_001424_080 0.1200945818 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
4 Hb_000223_050 0.122558813 - - PREDICTED: endochitinase A-like [Jatropha curcas]
5 Hb_005306_040 0.1274407398 - - calmodulin binding protein, putative [Ricinus communis]
6 Hb_034342_010 0.1344142597 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000512_080 0.139643519 - - ankyrin repeat-containing protein, putative [Ricinus communis]
8 Hb_151281_010 0.1437397965 - - PREDICTED: LOW QUALITY PROTEIN: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
9 Hb_165404_010 0.147862893 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
10 Hb_000035_300 0.1479907461 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000676_030 0.1506473784 - - PREDICTED: probable mitochondrial chaperone BCS1-B [Jatropha curcas]
12 Hb_000692_180 0.1513928629 - - PREDICTED: uncharacterized protein At1g76070 [Jatropha curcas]
13 Hb_000075_110 0.1547358215 - - aldo-keto reductase, putative [Ricinus communis]
14 Hb_079955_010 0.1572473823 transcription factor TF Family: MYB-related PREDICTED: myb-related protein Myb4-like [Populus euphratica]
15 Hb_002215_010 0.158504909 - - receptor protein kinase, putative [Ricinus communis]
16 Hb_011791_010 0.1643804967 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
17 Hb_001663_100 0.1679269167 - - -
18 Hb_002621_030 0.1689807087 - - hypothetical protein CISIN_1g006155mg [Citrus sinensis]
19 Hb_055147_010 0.169528902 - - thioredoxin H-type 7 [Hevea brasiliensis]
20 Hb_000322_200 0.1698682876 transcription factor TF Family: bHLH PREDICTED: putative transcription factor bHLH041 [Jatropha curcas]

Gene co-expression network

sample Hb_001481_030 Hb_001481_030 Hb_000720_110 Hb_000720_110 Hb_001481_030--Hb_000720_110 Hb_001424_080 Hb_001424_080 Hb_001481_030--Hb_001424_080 Hb_000223_050 Hb_000223_050 Hb_001481_030--Hb_000223_050 Hb_005306_040 Hb_005306_040 Hb_001481_030--Hb_005306_040 Hb_034342_010 Hb_034342_010 Hb_001481_030--Hb_034342_010 Hb_000512_080 Hb_000512_080 Hb_001481_030--Hb_000512_080 Hb_000720_110--Hb_005306_040 Hb_000692_180 Hb_000692_180 Hb_000720_110--Hb_000692_180 Hb_165404_010 Hb_165404_010 Hb_000720_110--Hb_165404_010 Hb_055147_010 Hb_055147_010 Hb_000720_110--Hb_055147_010 Hb_000075_110 Hb_000075_110 Hb_000720_110--Hb_000075_110 Hb_001424_080--Hb_034342_010 Hb_001663_100 Hb_001663_100 Hb_001424_080--Hb_001663_100 Hb_126077_020 Hb_126077_020 Hb_001424_080--Hb_126077_020 Hb_001424_080--Hb_000692_180 Hb_003556_060 Hb_003556_060 Hb_001424_080--Hb_003556_060 Hb_002400_250 Hb_002400_250 Hb_001424_080--Hb_002400_250 Hb_000223_050--Hb_000512_080 Hb_000223_050--Hb_000075_110 Hb_006970_150 Hb_006970_150 Hb_000223_050--Hb_006970_150 Hb_000223_050--Hb_165404_010 Hb_002085_070 Hb_002085_070 Hb_000223_050--Hb_002085_070 Hb_000343_280 Hb_000343_280 Hb_005306_040--Hb_000343_280 Hb_005306_040--Hb_055147_010 Hb_100873_040 Hb_100873_040 Hb_005306_040--Hb_100873_040 Hb_005306_040--Hb_000692_180 Hb_034342_010--Hb_126077_020 Hb_034342_010--Hb_003556_060 Hb_034342_010--Hb_001663_100 Hb_022998_010 Hb_022998_010 Hb_034342_010--Hb_022998_010 Hb_034342_010--Hb_000692_180 Hb_003636_010 Hb_003636_010 Hb_000512_080--Hb_003636_010 Hb_152718_010 Hb_152718_010 Hb_000512_080--Hb_152718_010 Hb_001514_100 Hb_001514_100 Hb_000512_080--Hb_001514_100 Hb_000265_020 Hb_000265_020 Hb_000512_080--Hb_000265_020 Hb_000512_080--Hb_002085_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.7476 0.780183 0.385853 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0475382 0 0 1.71208 0

CAGE analysis