Hb_001663_100

Information

Type -
Description -
Location Contig1663: 65053-66216
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001663_100 0.0 - - -
2 Hb_000692_180 0.0579498216 - - PREDICTED: uncharacterized protein At1g76070 [Jatropha curcas]
3 Hb_001424_080 0.0774477416 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
4 Hb_034342_010 0.0811327421 - - conserved hypothetical protein [Ricinus communis]
5 Hb_022998_010 0.0823423338 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_126077_020 0.0971153919 - - Kinase family protein with leucine-rich repeat domain [Theobroma cacao]
7 Hb_000462_020 0.0984799664 - - UDP-glucosyltransferase, putative [Ricinus communis]
8 Hb_007432_050 0.1187299964 transcription factor TF Family: MYB PREDICTED: transcription factor MYB108 [Jatropha curcas]
9 Hb_002400_250 0.1207839208 - - amino acid binding protein, putative [Ricinus communis]
10 Hb_186298_010 0.1366329058 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_003556_060 0.1379854199 - - -
12 Hb_001621_020 0.1380198452 - - -
13 Hb_000649_030 0.142185805 - - scab resistance family protein [Populus trichocarpa]
14 Hb_000720_110 0.1576591032 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
15 Hb_002374_110 0.1615252005 - - PREDICTED: uncharacterized protein LOC105638965 [Jatropha curcas]
16 Hb_001863_460 0.1631422385 transcription factor TF Family: MYB PREDICTED: protein ODORANT1 [Jatropha curcas]
17 Hb_001221_480 0.1631842061 - - metal ion binding protein, putative [Ricinus communis]
18 Hb_004452_080 0.1645929821 - - ring finger protein, putative [Ricinus communis]
19 Hb_001355_110 0.1646556927 - - PREDICTED: mitochondrial chaperone BCS1-like isoform X1 [Jatropha curcas]
20 Hb_004931_060 0.1649163001 transcription factor TF Family: MYB-related PREDICTED: myb-related protein Myb4 [Nelumbo nucifera]

Gene co-expression network

sample Hb_001663_100 Hb_001663_100 Hb_000692_180 Hb_000692_180 Hb_001663_100--Hb_000692_180 Hb_001424_080 Hb_001424_080 Hb_001663_100--Hb_001424_080 Hb_034342_010 Hb_034342_010 Hb_001663_100--Hb_034342_010 Hb_022998_010 Hb_022998_010 Hb_001663_100--Hb_022998_010 Hb_126077_020 Hb_126077_020 Hb_001663_100--Hb_126077_020 Hb_000462_020 Hb_000462_020 Hb_001663_100--Hb_000462_020 Hb_000692_180--Hb_001424_080 Hb_000692_180--Hb_034342_010 Hb_000720_110 Hb_000720_110 Hb_000692_180--Hb_000720_110 Hb_000692_180--Hb_000462_020 Hb_000692_180--Hb_022998_010 Hb_001424_080--Hb_034342_010 Hb_001424_080--Hb_126077_020 Hb_003556_060 Hb_003556_060 Hb_001424_080--Hb_003556_060 Hb_002400_250 Hb_002400_250 Hb_001424_080--Hb_002400_250 Hb_034342_010--Hb_126077_020 Hb_034342_010--Hb_003556_060 Hb_034342_010--Hb_022998_010 Hb_022998_010--Hb_126077_020 Hb_007432_050 Hb_007432_050 Hb_022998_010--Hb_007432_050 Hb_000649_030 Hb_000649_030 Hb_022998_010--Hb_000649_030 Hb_022998_010--Hb_003556_060 Hb_126077_020--Hb_003556_060 Hb_186298_010 Hb_186298_010 Hb_126077_020--Hb_186298_010 Hb_000462_020--Hb_002400_250 Hb_002374_110 Hb_002374_110 Hb_000462_020--Hb_002374_110 Hb_004931_060 Hb_004931_060 Hb_000462_020--Hb_004931_060 Hb_001596_040 Hb_001596_040 Hb_000462_020--Hb_001596_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.47784 0.152455 0.121307 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.655729 0

CAGE analysis