Hb_022998_010

Information

Type -
Description -
Location Contig22998: 3520-12947
Sequence    

Annotation

kegg
ID rcu:RCOM_1494390
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.25)
nr
ID XP_002516045.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q9C821
description Proline-rich receptor-like protein kinase PERK15 OS=Arabidopsis thaliana GN=PERK15 PE=2 SV=1
trembl
ID B9RQM6
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1494390 PE=3 SV=1
Gene Ontology
ID GO:0000166
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_022998_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_126077_020 0.0739706554 - - Kinase family protein with leucine-rich repeat domain [Theobroma cacao]
3 Hb_001663_100 0.0823423338 - - -
4 Hb_007432_050 0.0890501062 transcription factor TF Family: MYB PREDICTED: transcription factor MYB108 [Jatropha curcas]
5 Hb_000649_030 0.0939265428 - - scab resistance family protein [Populus trichocarpa]
6 Hb_034342_010 0.1014820411 - - conserved hypothetical protein [Ricinus communis]
7 Hb_003556_060 0.1017467434 - - -
8 Hb_001424_080 0.1183387846 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
9 Hb_004452_080 0.1226256932 - - ring finger protein, putative [Ricinus communis]
10 Hb_186298_010 0.1234848236 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_000692_180 0.127101715 - - PREDICTED: uncharacterized protein At1g76070 [Jatropha curcas]
12 Hb_002003_020 0.1296386105 - - PREDICTED: UDP-glycosyltransferase 74F1-like [Jatropha curcas]
13 Hb_017866_020 0.1393261462 transcription factor TF Family: WRKY WRKY transcription factor 40 [Jatropha curcas]
14 Hb_000616_050 0.1404657887 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
15 Hb_002716_080 0.1410680566 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
16 Hb_001221_480 0.1417228838 - - metal ion binding protein, putative [Ricinus communis]
17 Hb_001863_460 0.1462937568 transcription factor TF Family: MYB PREDICTED: protein ODORANT1 [Jatropha curcas]
18 Hb_001283_010 0.1463351572 transcription factor TF Family: LOB LOB domain-containing protein 15 [Populus tremula x Populus tremuloides]
19 Hb_019229_020 0.1465616886 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
20 Hb_000462_020 0.1507926435 - - UDP-glucosyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_022998_010 Hb_022998_010 Hb_126077_020 Hb_126077_020 Hb_022998_010--Hb_126077_020 Hb_001663_100 Hb_001663_100 Hb_022998_010--Hb_001663_100 Hb_007432_050 Hb_007432_050 Hb_022998_010--Hb_007432_050 Hb_000649_030 Hb_000649_030 Hb_022998_010--Hb_000649_030 Hb_034342_010 Hb_034342_010 Hb_022998_010--Hb_034342_010 Hb_003556_060 Hb_003556_060 Hb_022998_010--Hb_003556_060 Hb_126077_020--Hb_034342_010 Hb_126077_020--Hb_003556_060 Hb_001424_080 Hb_001424_080 Hb_126077_020--Hb_001424_080 Hb_126077_020--Hb_001663_100 Hb_186298_010 Hb_186298_010 Hb_126077_020--Hb_186298_010 Hb_000692_180 Hb_000692_180 Hb_001663_100--Hb_000692_180 Hb_001663_100--Hb_001424_080 Hb_001663_100--Hb_034342_010 Hb_000462_020 Hb_000462_020 Hb_001663_100--Hb_000462_020 Hb_127743_030 Hb_127743_030 Hb_007432_050--Hb_127743_030 Hb_003166_040 Hb_003166_040 Hb_007432_050--Hb_003166_040 Hb_007432_050--Hb_000649_030 Hb_002374_110 Hb_002374_110 Hb_007432_050--Hb_002374_110 Hb_058526_010 Hb_058526_010 Hb_007432_050--Hb_058526_010 Hb_000237_150 Hb_000237_150 Hb_000649_030--Hb_000237_150 Hb_000238_060 Hb_000238_060 Hb_000649_030--Hb_000238_060 Hb_000616_050 Hb_000616_050 Hb_000649_030--Hb_000616_050 Hb_019229_020 Hb_019229_020 Hb_000649_030--Hb_019229_020 Hb_111582_010 Hb_111582_010 Hb_000649_030--Hb_111582_010 Hb_034342_010--Hb_001424_080 Hb_034342_010--Hb_003556_060 Hb_034342_010--Hb_000692_180 Hb_003556_060--Hb_001424_080 Hb_017866_020 Hb_017866_020 Hb_003556_060--Hb_017866_020 Hb_000077_460 Hb_000077_460 Hb_003556_060--Hb_000077_460
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.048313 0.0104013 0.0194013 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0758066 0

CAGE analysis