Hb_000075_110

Information

Type -
Description -
Location Contig75: 172163-174505
Sequence    

Annotation

kegg
ID rcu:RCOM_1157800
description aldo-keto reductase, putative (EC:1.1.1.21)
nr
ID XP_002529871.1
description aldo-keto reductase, putative [Ricinus communis]
swissprot
ID Q0PGJ6
description Aldo-keto reductase family 4 member C9 OS=Arabidopsis thaliana GN=AKR4C9 PE=1 SV=1
trembl
ID B9SV52
description Aldo-keto reductase, putative OS=Ricinus communis GN=RCOM_1157800 PE=4 SV=1
Gene Ontology
ID GO:0009507
description aldo-keto reductase family 4 member c9-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56832: 172179-174500
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000075_110 0.0 - - aldo-keto reductase, putative [Ricinus communis]
2 Hb_165404_010 0.0484504823 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
3 Hb_007765_140 0.0742650212 - - PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Jatropha curcas]
4 Hb_000598_020 0.0895141357 - - PREDICTED: PRA1 family protein F2-like [Jatropha curcas]
5 Hb_000120_070 0.0960704775 - - PREDICTED: uncharacterized protein LOC105630351 [Jatropha curcas]
6 Hb_008215_010 0.1020624071 - - conserved hypothetical protein [Ricinus communis]
7 Hb_006970_150 0.1054273725 - - PREDICTED: uncharacterized protein LOC105650471 [Jatropha curcas]
8 Hb_000417_120 0.1062202159 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
9 Hb_075449_040 0.1069987386 - - PREDICTED: meiotic recombination protein SPO11-1 [Jatropha curcas]
10 Hb_000771_030 0.110233221 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
11 Hb_065230_010 0.1107166159 - - PREDICTED: uncharacterized protein LOC100814166 isoform X1 [Glycine max]
12 Hb_000836_390 0.1133536942 - - PREDICTED: neurofilament light polypeptide-like [Gossypium raimondii]
13 Hb_006634_080 0.1197664316 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-3b [Jatropha curcas]
14 Hb_000223_050 0.1203899185 - - PREDICTED: endochitinase A-like [Jatropha curcas]
15 Hb_000098_250 0.1216265176 - - UDP-glucose flavonoid 3-O-glucosyltransferase [Medicago truncatula]
16 Hb_002085_070 0.1262820104 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
17 Hb_002410_010 0.1263754259 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
18 Hb_000265_020 0.1314886384 - - hypothetical protein POPTR_0011s16980g, partial [Populus trichocarpa]
19 Hb_000046_590 0.1319274872 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
20 Hb_003556_070 0.1331238133 - - metal ion binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000075_110 Hb_000075_110 Hb_165404_010 Hb_165404_010 Hb_000075_110--Hb_165404_010 Hb_007765_140 Hb_007765_140 Hb_000075_110--Hb_007765_140 Hb_000598_020 Hb_000598_020 Hb_000075_110--Hb_000598_020 Hb_000120_070 Hb_000120_070 Hb_000075_110--Hb_000120_070 Hb_008215_010 Hb_008215_010 Hb_000075_110--Hb_008215_010 Hb_006970_150 Hb_006970_150 Hb_000075_110--Hb_006970_150 Hb_165404_010--Hb_007765_140 Hb_065230_010 Hb_065230_010 Hb_165404_010--Hb_065230_010 Hb_165404_010--Hb_008215_010 Hb_075449_040 Hb_075449_040 Hb_165404_010--Hb_075449_040 Hb_165404_010--Hb_000120_070 Hb_000836_390 Hb_000836_390 Hb_007765_140--Hb_000836_390 Hb_007765_140--Hb_075449_040 Hb_007765_140--Hb_008215_010 Hb_007765_140--Hb_000120_070 Hb_000417_120 Hb_000417_120 Hb_000598_020--Hb_000417_120 Hb_000771_030 Hb_000771_030 Hb_000598_020--Hb_000771_030 Hb_000110_030 Hb_000110_030 Hb_000598_020--Hb_000110_030 Hb_000598_020--Hb_165404_010 Hb_005628_050 Hb_005628_050 Hb_000598_020--Hb_005628_050 Hb_000120_070--Hb_000836_390 Hb_000120_070--Hb_008215_010 Hb_003556_070 Hb_003556_070 Hb_000120_070--Hb_003556_070 Hb_000120_070--Hb_006970_150 Hb_008215_010--Hb_000836_390 Hb_000046_590 Hb_000046_590 Hb_008215_010--Hb_000046_590 Hb_033045_010 Hb_033045_010 Hb_006970_150--Hb_033045_010 Hb_002518_270 Hb_002518_270 Hb_006970_150--Hb_002518_270 Hb_000265_020 Hb_000265_020 Hb_006970_150--Hb_000265_020 Hb_008948_080 Hb_008948_080 Hb_006970_150--Hb_008948_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 70.8285 26.6767 17.3679 0.0299518 0.0157819
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.281847 0.0554309 0.103701 40.7406 4.84792

CAGE analysis