Hb_165404_010

Information

Type -
Description -
Location Contig165404: 26-996
Sequence    

Annotation

kegg
ID tcc:TCM_010451
description Nitrate transporter2.5
nr
ID XP_012085446.1
description PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
swissprot
ID Q9LPV5
description High affinity nitrate transporter 2.5 OS=Arabidopsis thaliana GN=NRT2.5 PE=2 SV=1
trembl
ID A0A067K305
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17788 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_165404_010 0.0 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
2 Hb_000075_110 0.0484504823 - - aldo-keto reductase, putative [Ricinus communis]
3 Hb_007765_140 0.0724784696 - - PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Jatropha curcas]
4 Hb_065230_010 0.1049451129 - - PREDICTED: uncharacterized protein LOC100814166 isoform X1 [Glycine max]
5 Hb_008215_010 0.1091300415 - - conserved hypothetical protein [Ricinus communis]
6 Hb_075449_040 0.1117744247 - - PREDICTED: meiotic recombination protein SPO11-1 [Jatropha curcas]
7 Hb_000120_070 0.1123064531 - - PREDICTED: uncharacterized protein LOC105630351 [Jatropha curcas]
8 Hb_000598_020 0.1126577921 - - PREDICTED: PRA1 family protein F2-like [Jatropha curcas]
9 Hb_000836_390 0.1153771898 - - PREDICTED: neurofilament light polypeptide-like [Gossypium raimondii]
10 Hb_000771_030 0.1209248984 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
11 Hb_000720_110 0.1222631805 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
12 Hb_000417_120 0.1226315671 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
13 Hb_002410_010 0.1226673379 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
14 Hb_006634_080 0.1235275674 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-3b [Jatropha curcas]
15 Hb_000223_050 0.1281138597 - - PREDICTED: endochitinase A-like [Jatropha curcas]
16 Hb_020648_020 0.1328547503 - - xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis]
17 Hb_002085_070 0.1346126718 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
18 Hb_000098_250 0.1349839287 - - UDP-glucose flavonoid 3-O-glucosyltransferase [Medicago truncatula]
19 Hb_000046_590 0.1362801293 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
20 Hb_006970_150 0.1372400706 - - PREDICTED: uncharacterized protein LOC105650471 [Jatropha curcas]

Gene co-expression network

sample Hb_165404_010 Hb_165404_010 Hb_000075_110 Hb_000075_110 Hb_165404_010--Hb_000075_110 Hb_007765_140 Hb_007765_140 Hb_165404_010--Hb_007765_140 Hb_065230_010 Hb_065230_010 Hb_165404_010--Hb_065230_010 Hb_008215_010 Hb_008215_010 Hb_165404_010--Hb_008215_010 Hb_075449_040 Hb_075449_040 Hb_165404_010--Hb_075449_040 Hb_000120_070 Hb_000120_070 Hb_165404_010--Hb_000120_070 Hb_000075_110--Hb_007765_140 Hb_000598_020 Hb_000598_020 Hb_000075_110--Hb_000598_020 Hb_000075_110--Hb_000120_070 Hb_000075_110--Hb_008215_010 Hb_006970_150 Hb_006970_150 Hb_000075_110--Hb_006970_150 Hb_000836_390 Hb_000836_390 Hb_007765_140--Hb_000836_390 Hb_007765_140--Hb_075449_040 Hb_007765_140--Hb_008215_010 Hb_007765_140--Hb_000120_070 Hb_000771_030 Hb_000771_030 Hb_065230_010--Hb_000771_030 Hb_131662_010 Hb_131662_010 Hb_065230_010--Hb_131662_010 Hb_002410_010 Hb_002410_010 Hb_065230_010--Hb_002410_010 Hb_000098_250 Hb_000098_250 Hb_065230_010--Hb_000098_250 Hb_000417_120 Hb_000417_120 Hb_065230_010--Hb_000417_120 Hb_020648_020 Hb_020648_020 Hb_065230_010--Hb_020648_020 Hb_008215_010--Hb_000836_390 Hb_008215_010--Hb_000120_070 Hb_000046_590 Hb_000046_590 Hb_008215_010--Hb_000046_590 Hb_046101_010 Hb_046101_010 Hb_075449_040--Hb_046101_010 Hb_075449_040--Hb_000075_110 Hb_075449_040--Hb_000836_390 Hb_000359_280 Hb_000359_280 Hb_075449_040--Hb_000359_280 Hb_000120_070--Hb_000836_390 Hb_003556_070 Hb_003556_070 Hb_000120_070--Hb_003556_070 Hb_000120_070--Hb_006970_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.85008 0.62204 0.478504 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.11438 0.0978274

CAGE analysis