Hb_000359_280

Information

Type -
Description -
Location Contig359: 276880-285139
Sequence    

Annotation

kegg
ID egr:104427360
description uncharacterized LOC104427360
nr
ID EEC76991.1
description hypothetical protein OsI_15300 [Oryza sativa Indica Group]
swissprot
ID Q54WD7
description Probable serine/threonine-protein kinase DDB_G0279719 OS=Dictyostelium discoideum GN=DDB_G0279719 PE=2 SV=1
trembl
ID K4CG91
description Uncharacterized protein OS=Solanum lycopersicum GN=Solyc07g055570.1 PE=4 SV=1
Gene Ontology
ID GO:0004672
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37070: 276769-277125
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000359_280 0.0 - - hypothetical protein OsI_15300 [Oryza sativa Indica Group]
2 Hb_001102_270 0.0447551327 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
3 Hb_187991_010 0.0618559628 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
4 Hb_063523_010 0.0708918518 - - -
5 Hb_008783_020 0.1057640617 - - hypothetical protein JCGZ_21284 [Jatropha curcas]
6 Hb_000008_080 0.1073999255 - - conserved hypothetical protein [Ricinus communis]
7 Hb_007765_140 0.107960507 - - PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Jatropha curcas]
8 Hb_107809_010 0.1104499222 - - JHL06P13.14 [Jatropha curcas]
9 Hb_075449_040 0.1115426088 - - PREDICTED: meiotic recombination protein SPO11-1 [Jatropha curcas]
10 Hb_000403_110 0.1214237332 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
11 Hb_005542_040 0.1215002388 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
12 Hb_000163_250 0.1259818314 - - unnamed protein product [Vitis vinifera]
13 Hb_011472_020 0.1266808848 - - PREDICTED: mucin-17-like [Jatropha curcas]
14 Hb_001621_020 0.1273986016 - - -
15 Hb_001355_110 0.1304245795 - - PREDICTED: mitochondrial chaperone BCS1-like isoform X1 [Jatropha curcas]
16 Hb_033045_010 0.130674772 - - copine, putative [Ricinus communis]
17 Hb_031862_020 0.131317365 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
18 Hb_000489_020 0.1317402401 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Populus euphratica]
19 Hb_008215_010 0.1334106302 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001894_040 0.1334555798 - - PREDICTED: carbonic anhydrase 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000359_280 Hb_000359_280 Hb_001102_270 Hb_001102_270 Hb_000359_280--Hb_001102_270 Hb_187991_010 Hb_187991_010 Hb_000359_280--Hb_187991_010 Hb_063523_010 Hb_063523_010 Hb_000359_280--Hb_063523_010 Hb_008783_020 Hb_008783_020 Hb_000359_280--Hb_008783_020 Hb_000008_080 Hb_000008_080 Hb_000359_280--Hb_000008_080 Hb_007765_140 Hb_007765_140 Hb_000359_280--Hb_007765_140 Hb_001102_270--Hb_008783_020 Hb_001355_110 Hb_001355_110 Hb_001102_270--Hb_001355_110 Hb_001102_270--Hb_187991_010 Hb_001102_270--Hb_063523_010 Hb_001102_270--Hb_007765_140 Hb_187991_010--Hb_063523_010 Hb_031862_020 Hb_031862_020 Hb_187991_010--Hb_031862_020 Hb_005542_040 Hb_005542_040 Hb_187991_010--Hb_005542_040 Hb_187991_010--Hb_000008_080 Hb_033045_010 Hb_033045_010 Hb_063523_010--Hb_033045_010 Hb_107809_010 Hb_107809_010 Hb_063523_010--Hb_107809_010 Hb_063523_010--Hb_031862_020 Hb_000403_110 Hb_000403_110 Hb_008783_020--Hb_000403_110 Hb_008783_020--Hb_107809_010 Hb_005276_220 Hb_005276_220 Hb_008783_020--Hb_005276_220 Hb_001421_010 Hb_001421_010 Hb_008783_020--Hb_001421_010 Hb_175758_010 Hb_175758_010 Hb_008783_020--Hb_175758_010 Hb_000163_250 Hb_000163_250 Hb_000008_080--Hb_000163_250 Hb_001894_040 Hb_001894_040 Hb_000008_080--Hb_001894_040 Hb_001636_010 Hb_001636_010 Hb_000008_080--Hb_001636_010 Hb_000008_080--Hb_001102_270 Hb_000085_230 Hb_000085_230 Hb_000008_080--Hb_000085_230 Hb_000836_390 Hb_000836_390 Hb_007765_140--Hb_000836_390 Hb_165404_010 Hb_165404_010 Hb_007765_140--Hb_165404_010 Hb_000075_110 Hb_000075_110 Hb_007765_140--Hb_000075_110 Hb_075449_040 Hb_075449_040 Hb_007765_140--Hb_075449_040 Hb_008215_010 Hb_008215_010 Hb_007765_140--Hb_008215_010 Hb_000120_070 Hb_000120_070 Hb_007765_140--Hb_000120_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.198833 0.115352 0.0538148 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.215856 0.0483895

CAGE analysis