Hb_107809_010

Information

Type -
Description -
Location Contig107809: 10-1513
Sequence    

Annotation

kegg
ID pvu:PHAVU_004G0480000
description hypothetical protein
nr
ID BAJ53233.1
description JHL06P13.14 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUC3
description JHL06P13.14 protein OS=Jatropha curcas GN=JHL06P13.14 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_107809_010 0.0 - - JHL06P13.14 [Jatropha curcas]
2 Hb_005542_040 0.0606392272 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
3 Hb_001634_080 0.0784713362 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
4 Hb_008783_020 0.0849118877 - - hypothetical protein JCGZ_21284 [Jatropha curcas]
5 Hb_000108_090 0.0864466163 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
6 Hb_005276_220 0.096460991 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
7 Hb_000521_360 0.100537626 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
8 Hb_000403_110 0.1057229174 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
9 Hb_007676_040 0.1095435726 - - cellulose synthase, putative [Ricinus communis]
10 Hb_000359_280 0.1104499222 - - hypothetical protein OsI_15300 [Oryza sativa Indica Group]
11 Hb_170878_050 0.1131083508 - - retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]
12 Hb_000163_250 0.1149323631 - - unnamed protein product [Vitis vinifera]
13 Hb_001102_270 0.1169898816 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
14 Hb_063523_010 0.1180532623 - - -
15 Hb_187991_010 0.1195196481 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
16 Hb_001318_120 0.1208175174 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
17 Hb_007919_030 0.1252825662 - - -
18 Hb_011472_020 0.1258250893 - - PREDICTED: mucin-17-like [Jatropha curcas]
19 Hb_001565_010 0.1265519683 - - hypothetical protein JCGZ_07371 [Jatropha curcas]
20 Hb_001345_010 0.1341905879 - - hypothetical protein MIMGU_mgv1a010889mg [Erythranthe guttata]

Gene co-expression network

sample Hb_107809_010 Hb_107809_010 Hb_005542_040 Hb_005542_040 Hb_107809_010--Hb_005542_040 Hb_001634_080 Hb_001634_080 Hb_107809_010--Hb_001634_080 Hb_008783_020 Hb_008783_020 Hb_107809_010--Hb_008783_020 Hb_000108_090 Hb_000108_090 Hb_107809_010--Hb_000108_090 Hb_005276_220 Hb_005276_220 Hb_107809_010--Hb_005276_220 Hb_000521_360 Hb_000521_360 Hb_107809_010--Hb_000521_360 Hb_007676_040 Hb_007676_040 Hb_005542_040--Hb_007676_040 Hb_005542_040--Hb_005276_220 Hb_001318_120 Hb_001318_120 Hb_005542_040--Hb_001318_120 Hb_005542_040--Hb_000108_090 Hb_011472_020 Hb_011472_020 Hb_005542_040--Hb_011472_020 Hb_001634_080--Hb_000108_090 Hb_001634_080--Hb_005542_040 Hb_127661_010 Hb_127661_010 Hb_001634_080--Hb_127661_010 Hb_170878_050 Hb_170878_050 Hb_001634_080--Hb_170878_050 Hb_001634_080--Hb_007676_040 Hb_000403_110 Hb_000403_110 Hb_008783_020--Hb_000403_110 Hb_008783_020--Hb_005276_220 Hb_001102_270 Hb_001102_270 Hb_008783_020--Hb_001102_270 Hb_001421_010 Hb_001421_010 Hb_008783_020--Hb_001421_010 Hb_175758_010 Hb_175758_010 Hb_008783_020--Hb_175758_010 Hb_001565_010 Hb_001565_010 Hb_000108_090--Hb_001565_010 Hb_000108_090--Hb_007676_040 Hb_094148_010 Hb_094148_010 Hb_000108_090--Hb_094148_010 Hb_005276_220--Hb_011472_020 Hb_005276_220--Hb_000403_110 Hb_005276_220--Hb_001318_120 Hb_005276_220--Hb_175758_010 Hb_010519_020 Hb_010519_020 Hb_005276_220--Hb_010519_020 Hb_001345_010 Hb_001345_010 Hb_000521_360--Hb_001345_010 Hb_000521_360--Hb_005542_040 Hb_000521_360--Hb_001565_010 Hb_000521_360--Hb_005276_220 Hb_000521_360--Hb_007676_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.134744 0.10089 0.0375134 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.205498 0.0804985

CAGE analysis