Hb_000403_110

Information

Type transcription factor
Description TF Family: WRKY
Location Contig403: 231698-235325
Sequence    

Annotation

kegg
ID pop:POPTR_0007s06720g
description POPTRDRAFT_562724; hypothetical protein
nr
ID XP_012075251.1
description PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
swissprot
ID Q93WU9
description Probable WRKY transcription factor 51 OS=Arabidopsis thaliana GN=WRKY51 PE=1 SV=1
trembl
ID S5CKE4
description Uncharacterized protein OS=Jatropha curcas GN=WRKY12 PE=4 SV=1
Gene Ontology
ID GO:0003700
description probable wrky transcription factor 51

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000403_110 0.0 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
2 Hb_008783_020 0.0705658988 - - hypothetical protein JCGZ_21284 [Jatropha curcas]
3 Hb_001421_010 0.0717614354 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator-like APRR2 isoform X1 [Jatropha curcas]
4 Hb_005276_220 0.0726618284 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
5 Hb_010519_020 0.0807213665 - - hypothetical protein JCGZ_19028 [Jatropha curcas]
6 Hb_175758_010 0.0808594559 - - PREDICTED: aspartic proteinase A1-like isoform X2 [Jatropha curcas]
7 Hb_001318_120 0.0836090569 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
8 Hb_011472_020 0.0845092647 - - PREDICTED: mucin-17-like [Jatropha curcas]
9 Hb_000011_120 0.100635087 - - PREDICTED: ATPase 10, plasma membrane-type-like [Populus euphratica]
10 Hb_107809_010 0.1057229174 - - JHL06P13.14 [Jatropha curcas]
11 Hb_005542_040 0.1063564144 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
12 Hb_000163_250 0.1119238011 - - unnamed protein product [Vitis vinifera]
13 Hb_006711_020 0.1119298278 - - hypothetical protein JCGZ_07258 [Jatropha curcas]
14 Hb_001329_110 0.1149221327 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
15 Hb_001102_270 0.1171881885 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
16 Hb_000840_050 0.1179820436 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Vitis vinifera]
17 Hb_000359_280 0.1214237332 - - hypothetical protein OsI_15300 [Oryza sativa Indica Group]
18 Hb_001636_010 0.1215740033 - - hypothetical protein JCGZ_01264 [Jatropha curcas]
19 Hb_010417_100 0.1227477098 - - PREDICTED: respiratory burst oxidase homolog protein A [Jatropha curcas]
20 Hb_004884_200 0.1246773793 - - PREDICTED: ferritin-3, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000403_110 Hb_000403_110 Hb_008783_020 Hb_008783_020 Hb_000403_110--Hb_008783_020 Hb_001421_010 Hb_001421_010 Hb_000403_110--Hb_001421_010 Hb_005276_220 Hb_005276_220 Hb_000403_110--Hb_005276_220 Hb_010519_020 Hb_010519_020 Hb_000403_110--Hb_010519_020 Hb_175758_010 Hb_175758_010 Hb_000403_110--Hb_175758_010 Hb_001318_120 Hb_001318_120 Hb_000403_110--Hb_001318_120 Hb_107809_010 Hb_107809_010 Hb_008783_020--Hb_107809_010 Hb_008783_020--Hb_005276_220 Hb_001102_270 Hb_001102_270 Hb_008783_020--Hb_001102_270 Hb_008783_020--Hb_001421_010 Hb_008783_020--Hb_175758_010 Hb_001421_010--Hb_175758_010 Hb_001421_010--Hb_010519_020 Hb_011472_020 Hb_011472_020 Hb_001421_010--Hb_011472_020 Hb_001329_110 Hb_001329_110 Hb_001421_010--Hb_001329_110 Hb_005276_220--Hb_011472_020 Hb_005276_220--Hb_001318_120 Hb_005542_040 Hb_005542_040 Hb_005276_220--Hb_005542_040 Hb_005276_220--Hb_175758_010 Hb_005276_220--Hb_010519_020 Hb_010519_020--Hb_001318_120 Hb_010519_020--Hb_175758_010 Hb_010519_020--Hb_011472_020 Hb_006711_020 Hb_006711_020 Hb_010519_020--Hb_006711_020 Hb_175758_010--Hb_001329_110 Hb_000011_120 Hb_000011_120 Hb_175758_010--Hb_000011_120 Hb_175758_010--Hb_001318_120 Hb_000840_050 Hb_000840_050 Hb_175758_010--Hb_000840_050 Hb_001318_120--Hb_011472_020 Hb_001318_120--Hb_001329_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.75292 2.11228 1.79703 0.0291795 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0563311 0 6.18894 1.80089

CAGE analysis