Hb_001329_110

Information

Type -
Description -
Location Contig1329: 72445-75540
Sequence    

Annotation

kegg
ID rcu:RCOM_1344360
description hypothetical protein
nr
ID XP_012082968.1
description PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K7S6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14086 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09392: 72672-75490
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001329_110 0.0 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
2 Hb_175758_010 0.0602989902 - - PREDICTED: aspartic proteinase A1-like isoform X2 [Jatropha curcas]
3 Hb_000011_120 0.0656768334 - - PREDICTED: ATPase 10, plasma membrane-type-like [Populus euphratica]
4 Hb_001318_120 0.0813313701 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
5 Hb_000840_050 0.0857518778 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Vitis vinifera]
6 Hb_010519_020 0.0857812792 - - hypothetical protein JCGZ_19028 [Jatropha curcas]
7 Hb_001421_010 0.0910232822 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator-like APRR2 isoform X1 [Jatropha curcas]
8 Hb_007123_020 0.0941039555 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
9 Hb_005211_090 0.0988761614 - - PREDICTED: aluminum-activated malate transporter 4-like isoform X1 [Jatropha curcas]
10 Hb_001514_070 0.1029777092 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_000203_080 0.1032698894 - - Xylem bark cysteine peptidase 3 isoform 1 [Theobroma cacao]
12 Hb_000403_110 0.1149221327 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
13 Hb_000236_050 0.1158983742 - - phosphate transporter [Manihot esculenta]
14 Hb_000317_220 0.116387974 - - conserved hypothetical protein [Ricinus communis]
15 Hb_009627_040 0.1175281469 - - Lipase class 3-related protein, putative [Theobroma cacao]
16 Hb_005276_220 0.1190797859 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
17 Hb_011472_020 0.1198624091 - - PREDICTED: mucin-17-like [Jatropha curcas]
18 Hb_138606_020 0.1209079482 - - Nitrate transporter2.5 [Theobroma cacao]
19 Hb_000112_050 0.1211518949 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1 [Jatropha curcas]
20 Hb_001114_120 0.1212875994 - - protein with unknown function [Ricinus communis]

Gene co-expression network

sample Hb_001329_110 Hb_001329_110 Hb_175758_010 Hb_175758_010 Hb_001329_110--Hb_175758_010 Hb_000011_120 Hb_000011_120 Hb_001329_110--Hb_000011_120 Hb_001318_120 Hb_001318_120 Hb_001329_110--Hb_001318_120 Hb_000840_050 Hb_000840_050 Hb_001329_110--Hb_000840_050 Hb_010519_020 Hb_010519_020 Hb_001329_110--Hb_010519_020 Hb_001421_010 Hb_001421_010 Hb_001329_110--Hb_001421_010 Hb_175758_010--Hb_001421_010 Hb_175758_010--Hb_010519_020 Hb_175758_010--Hb_000011_120 Hb_175758_010--Hb_001318_120 Hb_175758_010--Hb_000840_050 Hb_009627_040 Hb_009627_040 Hb_000011_120--Hb_009627_040 Hb_005211_090 Hb_005211_090 Hb_000011_120--Hb_005211_090 Hb_010839_010 Hb_010839_010 Hb_000011_120--Hb_010839_010 Hb_000011_120--Hb_001318_120 Hb_001318_120--Hb_010519_020 Hb_011472_020 Hb_011472_020 Hb_001318_120--Hb_011472_020 Hb_005276_220 Hb_005276_220 Hb_001318_120--Hb_005276_220 Hb_000403_110 Hb_000403_110 Hb_001318_120--Hb_000403_110 Hb_138606_020 Hb_138606_020 Hb_000840_050--Hb_138606_020 Hb_000203_080 Hb_000203_080 Hb_000840_050--Hb_000203_080 Hb_009659_040 Hb_009659_040 Hb_000840_050--Hb_009659_040 Hb_010417_100 Hb_010417_100 Hb_000840_050--Hb_010417_100 Hb_010519_020--Hb_001421_010 Hb_010519_020--Hb_011472_020 Hb_006711_020 Hb_006711_020 Hb_010519_020--Hb_006711_020 Hb_010519_020--Hb_000403_110 Hb_001421_010--Hb_000403_110 Hb_001421_010--Hb_011472_020 Hb_008783_020 Hb_008783_020 Hb_001421_010--Hb_008783_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 22.3844 14.2562 23.392 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.030572 0 0 53.1261 13.9488

CAGE analysis