Hb_127661_010

Information

Type -
Description -
Location Contig127661: 3-629
Sequence    

Annotation

kegg
ID rcu:RCOM_1080970
description serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74)
nr
ID XP_002514954.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q9LZV7
description Leucine-rich repeat receptor-like protein kinase PXC2 OS=Arabidopsis thaliana GN=PXC2 PE=2 SV=1
trembl
ID B9RMI5
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1080970 PE=4 SV=1
Gene Ontology
ID GO:0016491
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_127661_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_000261_370 0.047810451 - - -
3 Hb_016637_020 0.0838329727 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
4 Hb_029576_100 0.0842960287 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 31 [Jatropha curcas]
5 Hb_005496_170 0.0902023911 - - sigma factor sigb regulation protein rsbq, putative [Ricinus communis]
6 Hb_000680_020 0.0903256761 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
7 Hb_000501_040 0.0948593705 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
8 Hb_002849_120 0.0965427638 - - ferric reductase oxidase [Manihot esculenta]
9 Hb_001634_080 0.0995258838 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
10 Hb_007113_020 0.0999039109 - - -
11 Hb_000417_250 0.1146932314 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 65 [Jatropha curcas]
12 Hb_000108_090 0.1187587085 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
13 Hb_170878_050 0.1188723148 - - retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]
14 Hb_003683_200 0.119104997 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
15 Hb_010880_010 0.1221379616 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
16 Hb_007205_020 0.1236773591 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
17 Hb_001819_010 0.1239806751 - - PREDICTED: potassium transporter 8 [Jatropha curcas]
18 Hb_013786_010 0.1242231647 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_001160_020 0.1256456823 transcription factor TF Family: NF-YA Nuclear transcription factor Y subunit A-3, putative [Ricinus communis]
20 Hb_001153_090 0.1256671216 - - PREDICTED: protein FAM63A [Jatropha curcas]

Gene co-expression network

sample Hb_127661_010 Hb_127661_010 Hb_000261_370 Hb_000261_370 Hb_127661_010--Hb_000261_370 Hb_016637_020 Hb_016637_020 Hb_127661_010--Hb_016637_020 Hb_029576_100 Hb_029576_100 Hb_127661_010--Hb_029576_100 Hb_005496_170 Hb_005496_170 Hb_127661_010--Hb_005496_170 Hb_000680_020 Hb_000680_020 Hb_127661_010--Hb_000680_020 Hb_000501_040 Hb_000501_040 Hb_127661_010--Hb_000501_040 Hb_007113_020 Hb_007113_020 Hb_000261_370--Hb_007113_020 Hb_000261_370--Hb_029576_100 Hb_000261_370--Hb_005496_170 Hb_001634_080 Hb_001634_080 Hb_000261_370--Hb_001634_080 Hb_000261_370--Hb_016637_020 Hb_000191_100 Hb_000191_100 Hb_016637_020--Hb_000191_100 Hb_003494_180 Hb_003494_180 Hb_016637_020--Hb_003494_180 Hb_007205_020 Hb_007205_020 Hb_016637_020--Hb_007205_020 Hb_170878_050 Hb_170878_050 Hb_016637_020--Hb_170878_050 Hb_029866_110 Hb_029866_110 Hb_016637_020--Hb_029866_110 Hb_013786_010 Hb_013786_010 Hb_029576_100--Hb_013786_010 Hb_000417_250 Hb_000417_250 Hb_029576_100--Hb_000417_250 Hb_029576_100--Hb_000501_040 Hb_029576_100--Hb_000680_020 Hb_010880_010 Hb_010880_010 Hb_005496_170--Hb_010880_010 Hb_003224_010 Hb_003224_010 Hb_005496_170--Hb_003224_010 Hb_017098_050 Hb_017098_050 Hb_005496_170--Hb_017098_050 Hb_005496_170--Hb_016637_020 Hb_003683_200 Hb_003683_200 Hb_000680_020--Hb_003683_200 Hb_002849_120 Hb_002849_120 Hb_000680_020--Hb_002849_120 Hb_033153_040 Hb_033153_040 Hb_000680_020--Hb_033153_040 Hb_071130_020 Hb_071130_020 Hb_000680_020--Hb_071130_020 Hb_003077_140 Hb_003077_140 Hb_000680_020--Hb_003077_140 Hb_007420_010 Hb_007420_010 Hb_000501_040--Hb_007420_010 Hb_031862_020 Hb_031862_020 Hb_000501_040--Hb_031862_020 Hb_167272_010 Hb_167272_010 Hb_000501_040--Hb_167272_010 Hb_023344_130 Hb_023344_130 Hb_000501_040--Hb_023344_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.68431 4.80714 1.84441 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 5.11194 5.94226

CAGE analysis