Hb_033153_040

Information

Type -
Description -
Location Contig33153: 27211-33077
Sequence    

Annotation

kegg
ID rcu:RCOM_1011940
description o-methyltransferase, putative (EC:2.1.1.146)
nr
ID XP_002522501.1
description o-methyltransferase, putative [Ricinus communis]
swissprot
ID B6VJS4
description Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera GN=ROMT PE=1 SV=2
trembl
ID B9S932
description O-methyltransferase, putative OS=Ricinus communis GN=RCOM_1011940 PE=4 SV=1
Gene Ontology
ID GO:0033800
description trans-resveratrol di-o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34868: 30483-31903
cDNA
(Sanger)
(ID:Location)		 002_O12.ab1: 30933-31854 , 031_I06.ab1: 31131-31903

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033153_040 0.0 - - o-methyltransferase, putative [Ricinus communis]
2 Hb_002849_120 0.0692826327 - - ferric reductase oxidase [Manihot esculenta]
3 Hb_005569_030 0.0711193023 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Jatropha curcas]
4 Hb_000680_020 0.0888251131 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
5 Hb_003077_140 0.0894949098 - - hypothetical protein JCGZ_16294 [Jatropha curcas]
6 Hb_000313_100 0.0946103073 rubber biosynthesis Gene Name: CPT4 PREDICTED: rubber cis-polyprenyltransferase HRT2 [Jatropha curcas]
7 Hb_001153_090 0.0956256061 - - PREDICTED: protein FAM63A [Jatropha curcas]
8 Hb_064293_010 0.1023149345 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
9 Hb_175670_010 0.1088486982 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
10 Hb_006269_010 0.1105818871 - - hypothetical protein JCGZ_21552 [Jatropha curcas]
11 Hb_002818_070 0.1138735688 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
12 Hb_002783_140 0.1146697538 - - PREDICTED: uncharacterized protein LOC105635332 [Jatropha curcas]
13 Hb_007420_010 0.1186515413 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X2 [Jatropha curcas]
14 Hb_114310_050 0.121329786 - - Iron(III)-zinc(II) purple acid phosphatase precursor family protein [Populus trichocarpa]
15 Hb_003387_080 0.1214786037 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
16 Hb_000501_040 0.1253100404 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_000412_090 0.1255471494 - - receptor serine/threonine kinase, putative [Ricinus communis]
18 Hb_003562_040 0.1260678722 - - PREDICTED: septum-promoting GTP-binding protein 1-like [Jatropha curcas]
19 Hb_003683_200 0.1270319981 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
20 Hb_000260_480 0.1300620974 transcription factor TF Family: GRAS PREDICTED: protein SCARECROW [Jatropha curcas]

Gene co-expression network

sample Hb_033153_040 Hb_033153_040 Hb_002849_120 Hb_002849_120 Hb_033153_040--Hb_002849_120 Hb_005569_030 Hb_005569_030 Hb_033153_040--Hb_005569_030 Hb_000680_020 Hb_000680_020 Hb_033153_040--Hb_000680_020 Hb_003077_140 Hb_003077_140 Hb_033153_040--Hb_003077_140 Hb_000313_100 Hb_000313_100 Hb_033153_040--Hb_000313_100 Hb_001153_090 Hb_001153_090 Hb_033153_040--Hb_001153_090 Hb_002849_120--Hb_001153_090 Hb_003849_030 Hb_003849_030 Hb_002849_120--Hb_003849_030 Hb_002849_120--Hb_000680_020 Hb_001160_020 Hb_001160_020 Hb_002849_120--Hb_001160_020 Hb_127661_010 Hb_127661_010 Hb_002849_120--Hb_127661_010 Hb_005569_030--Hb_000313_100 Hb_175670_010 Hb_175670_010 Hb_005569_030--Hb_175670_010 Hb_002890_320 Hb_002890_320 Hb_005569_030--Hb_002890_320 Hb_001515_030 Hb_001515_030 Hb_005569_030--Hb_001515_030 Hb_167272_010 Hb_167272_010 Hb_005569_030--Hb_167272_010 Hb_003683_200 Hb_003683_200 Hb_000680_020--Hb_003683_200 Hb_000680_020--Hb_127661_010 Hb_071130_020 Hb_071130_020 Hb_000680_020--Hb_071130_020 Hb_000680_020--Hb_003077_140 Hb_000767_010 Hb_000767_010 Hb_003077_140--Hb_000767_010 Hb_003077_140--Hb_001153_090 Hb_123560_050 Hb_123560_050 Hb_003077_140--Hb_123560_050 Hb_001357_360 Hb_001357_360 Hb_003077_140--Hb_001357_360 Hb_002818_070 Hb_002818_070 Hb_003077_140--Hb_002818_070 Hb_000313_100--Hb_175670_010 Hb_004324_220 Hb_004324_220 Hb_000313_100--Hb_004324_220 Hb_000313_100--Hb_002890_320 Hb_001821_050 Hb_001821_050 Hb_000313_100--Hb_001821_050 Hb_006269_010 Hb_006269_010 Hb_001153_090--Hb_006269_010 Hb_007747_100 Hb_007747_100 Hb_001153_090--Hb_007747_100 Hb_023344_130 Hb_023344_130 Hb_001153_090--Hb_023344_130 Hb_001153_090--Hb_001160_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0173572 19.5193 10.0675 6.52061 0 0.00677851
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0527989 0.0415468 0 7.54506 14.8672

CAGE analysis