Hb_000767_010

Information

Type -
Description -
Location Contig767: 17302-21958
Sequence    

Annotation

kegg
ID cic:CICLE_v10027567mg
description hypothetical protein
nr
ID XP_010324706.1
description PREDICTED: geraniol 8-hydroxylase-like isoform X2 [Solanum lycopersicum]
swissprot
ID Q6ZSU1
description Putative inactive cytochrome P450 2G1 OS=Homo sapiens GN=CYP2G1P PE=5 SV=1
trembl
ID A0A0D2TFA7
description Gossypium raimondii chromosome 9, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_009G071700 PE=4 SV=1
Gene Ontology
ID GO:0005506
description cytochrome

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000767_010 0.0 - - PREDICTED: geraniol 8-hydroxylase-like isoform X2 [Solanum lycopersicum]
2 Hb_003077_140 0.0880446683 - - hypothetical protein JCGZ_16294 [Jatropha curcas]
3 Hb_026144_030 0.0896615662 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
4 Hb_001357_360 0.0989039114 - - zinc finger protein, putative [Ricinus communis]
5 Hb_028872_100 0.1102980052 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
6 Hb_008111_010 0.1103247108 - - hypothetical protein VITISV_021527 [Vitis vinifera]
7 Hb_004007_230 0.1161663508 - - PREDICTED: putative formamidase C869.04 isoform X1 [Jatropha curcas]
8 Hb_002818_070 0.1170252116 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
9 Hb_123560_050 0.1234947281 - - PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
10 Hb_005306_020 0.1250271297 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
11 Hb_000614_190 0.1253353192 desease resistance Gene Name: ABC_membrane PREDICTED: putative ABC transporter C family member 15 [Jatropha curcas]
12 Hb_001971_020 0.1283121882 - - PREDICTED: alpha-dioxygenase 2 [Populus euphratica]
13 Hb_004785_200 0.133329646 - - PREDICTED: protein MKS1 [Jatropha curcas]
14 Hb_005054_280 0.1338424684 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
15 Hb_000009_390 0.1356737959 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]
16 Hb_001706_020 0.136383569 - - PREDICTED: organic cation/carnitine transporter 7 [Jatropha curcas]
17 Hb_005305_030 0.1383996106 - - hypothetical protein JCGZ_25922 [Jatropha curcas]
18 Hb_005470_040 0.1390406091 - - hypothetical protein POPTR_0015s09760g [Populus trichocarpa]
19 Hb_001836_010 0.1434358183 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [Jatropha curcas]
20 Hb_003680_010 0.1447775795 - - UDP-glucosyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000767_010 Hb_000767_010 Hb_003077_140 Hb_003077_140 Hb_000767_010--Hb_003077_140 Hb_026144_030 Hb_026144_030 Hb_000767_010--Hb_026144_030 Hb_001357_360 Hb_001357_360 Hb_000767_010--Hb_001357_360 Hb_028872_100 Hb_028872_100 Hb_000767_010--Hb_028872_100 Hb_008111_010 Hb_008111_010 Hb_000767_010--Hb_008111_010 Hb_004007_230 Hb_004007_230 Hb_000767_010--Hb_004007_230 Hb_001153_090 Hb_001153_090 Hb_003077_140--Hb_001153_090 Hb_033153_040 Hb_033153_040 Hb_003077_140--Hb_033153_040 Hb_123560_050 Hb_123560_050 Hb_003077_140--Hb_123560_050 Hb_003077_140--Hb_001357_360 Hb_002818_070 Hb_002818_070 Hb_003077_140--Hb_002818_070 Hb_026144_030--Hb_008111_010 Hb_000614_190 Hb_000614_190 Hb_026144_030--Hb_000614_190 Hb_001143_140 Hb_001143_140 Hb_026144_030--Hb_001143_140 Hb_026144_030--Hb_123560_050 Hb_007420_020 Hb_007420_020 Hb_026144_030--Hb_007420_020 Hb_001971_020 Hb_001971_020 Hb_001357_360--Hb_001971_020 Hb_005470_040 Hb_005470_040 Hb_001357_360--Hb_005470_040 Hb_001357_360--Hb_123560_050 Hb_001357_360--Hb_004007_230 Hb_000685_140 Hb_000685_140 Hb_028872_100--Hb_000685_140 Hb_001411_100 Hb_001411_100 Hb_028872_100--Hb_001411_100 Hb_000417_150 Hb_000417_150 Hb_028872_100--Hb_000417_150 Hb_000101_320 Hb_000101_320 Hb_028872_100--Hb_000101_320 Hb_005306_020 Hb_005306_020 Hb_028872_100--Hb_005306_020 Hb_005054_280 Hb_005054_280 Hb_008111_010--Hb_005054_280 Hb_085010_010 Hb_085010_010 Hb_008111_010--Hb_085010_010 Hb_008111_010--Hb_005306_020 Hb_008111_010--Hb_001971_020 Hb_008111_010--Hb_001143_140 Hb_026053_030 Hb_026053_030 Hb_004007_230--Hb_026053_030 Hb_004143_140 Hb_004143_140 Hb_004007_230--Hb_004143_140 Hb_000044_050 Hb_000044_050 Hb_004007_230--Hb_000044_050 Hb_004007_230--Hb_003077_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.38885 0.706374 1.33062 0 0.00954492
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0451117 0 0 1.44039 2.88809

CAGE analysis