Hb_008111_010

Information

Type -
Description -
Location Contig8111: 147-2767
Sequence    

Annotation

kegg
ID cit:102609073
description receptor-like protein 12-like
nr
ID CAN80989.1
description hypothetical protein VITISV_021527 [Vitis vinifera]
swissprot
ID Q9LRT1
description Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1
trembl
ID A5BBW5
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021527 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008111_010 0.0 - - hypothetical protein VITISV_021527 [Vitis vinifera]
2 Hb_026144_030 0.0797044119 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
3 Hb_005054_280 0.0907407863 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
4 Hb_085010_010 0.0987517596 - - PREDICTED: MLO-like protein 3 isoform X2 [Vitis vinifera]
5 Hb_005306_020 0.1003489921 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
6 Hb_001971_020 0.1010538878 - - PREDICTED: alpha-dioxygenase 2 [Populus euphratica]
7 Hb_001143_140 0.1031813024 - - Aldehyde dehydrogenase, putative [Ricinus communis]
8 Hb_000614_190 0.103516644 desease resistance Gene Name: ABC_membrane PREDICTED: putative ABC transporter C family member 15 [Jatropha curcas]
9 Hb_000597_080 0.1099222954 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
10 Hb_000767_010 0.1103247108 - - PREDICTED: geraniol 8-hydroxylase-like isoform X2 [Solanum lycopersicum]
11 Hb_007420_020 0.1137085509 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
12 Hb_001357_360 0.1137321344 - - zinc finger protein, putative [Ricinus communis]
13 Hb_123560_050 0.1209584214 - - PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
14 Hb_000264_340 0.1288591956 - - PREDICTED: callose synthase 11-like isoform X1 [Jatropha curcas]
15 Hb_000563_120 0.1294043922 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
16 Hb_114310_050 0.1313271118 - - Iron(III)-zinc(II) purple acid phosphatase precursor family protein [Populus trichocarpa]
17 Hb_002000_130 0.1324570657 - - PREDICTED: abscisic stress-ripening protein 2-like [Eucalyptus grandis]
18 Hb_005034_010 0.1325466178 - - alcohol dehydrogenase, putative [Ricinus communis]
19 Hb_004307_070 0.1345749845 - - kinase, putative [Ricinus communis]
20 Hb_000377_160 0.1368226733 - - PREDICTED: oligopeptide transporter 3 [Jatropha curcas]

Gene co-expression network

sample Hb_008111_010 Hb_008111_010 Hb_026144_030 Hb_026144_030 Hb_008111_010--Hb_026144_030 Hb_005054_280 Hb_005054_280 Hb_008111_010--Hb_005054_280 Hb_085010_010 Hb_085010_010 Hb_008111_010--Hb_085010_010 Hb_005306_020 Hb_005306_020 Hb_008111_010--Hb_005306_020 Hb_001971_020 Hb_001971_020 Hb_008111_010--Hb_001971_020 Hb_001143_140 Hb_001143_140 Hb_008111_010--Hb_001143_140 Hb_000614_190 Hb_000614_190 Hb_026144_030--Hb_000614_190 Hb_000767_010 Hb_000767_010 Hb_026144_030--Hb_000767_010 Hb_026144_030--Hb_001143_140 Hb_123560_050 Hb_123560_050 Hb_026144_030--Hb_123560_050 Hb_007420_020 Hb_007420_020 Hb_026144_030--Hb_007420_020 Hb_005054_280--Hb_007420_020 Hb_114310_050 Hb_114310_050 Hb_005054_280--Hb_114310_050 Hb_005054_280--Hb_000614_190 Hb_003562_040 Hb_003562_040 Hb_005054_280--Hb_003562_040 Hb_005034_010 Hb_005034_010 Hb_005054_280--Hb_005034_010 Hb_011470_010 Hb_011470_010 Hb_085010_010--Hb_011470_010 Hb_126466_010 Hb_126466_010 Hb_085010_010--Hb_126466_010 Hb_002272_070 Hb_002272_070 Hb_085010_010--Hb_002272_070 Hb_085010_010--Hb_001971_020 Hb_085010_010--Hb_005306_020 Hb_005306_020--Hb_001971_020 Hb_001357_360 Hb_001357_360 Hb_005306_020--Hb_001357_360 Hb_028872_100 Hb_028872_100 Hb_005306_020--Hb_028872_100 Hb_000264_340 Hb_000264_340 Hb_005306_020--Hb_000264_340 Hb_005306_020--Hb_000767_010 Hb_001971_020--Hb_001357_360 Hb_000563_120 Hb_000563_120 Hb_001971_020--Hb_000563_120 Hb_001971_020--Hb_000264_340 Hb_007320_020 Hb_007320_020 Hb_001971_020--Hb_007320_020 Hb_004307_070 Hb_004307_070 Hb_001143_140--Hb_004307_070 Hb_012743_020 Hb_012743_020 Hb_001143_140--Hb_012743_020 Hb_002000_130 Hb_002000_130 Hb_001143_140--Hb_002000_130 Hb_003226_030 Hb_003226_030 Hb_001143_140--Hb_003226_030 Hb_001143_140--Hb_000614_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.150076 0.026979 0.0951014 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.106422 0.12974

CAGE analysis