Hb_003562_040

Information

Type -
Description -
Location Contig3562: 67479-69981
Sequence    

Annotation

kegg
ID cic:CICLE_v10017974mg
description hypothetical protein
nr
ID XP_012086336.1
description PREDICTED: septum-promoting GTP-binding protein 1-like [Jatropha curcas]
swissprot
ID P87027
description Septum-promoting GTP-binding protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spg1 PE=1 SV=1
trembl
ID A0A067K212
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22869 PE=4 SV=1
Gene Ontology
ID GO:0005622
description septum-promoting gtp-binding protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003562_040 0.0 - - PREDICTED: septum-promoting GTP-binding protein 1-like [Jatropha curcas]
2 Hb_005034_010 0.0748185261 - - alcohol dehydrogenase, putative [Ricinus communis]
3 Hb_001174_030 0.0792933542 - - unnamed protein product [Vitis vinifera]
4 Hb_005054_280 0.0835847114 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
5 Hb_005074_010 0.085326374 - - PREDICTED: uncharacterized protein LOC105644456 [Jatropha curcas]
6 Hb_175670_010 0.0884820609 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
7 Hb_007007_090 0.1012961732 - - phospholipase d beta, putative [Ricinus communis]
8 Hb_006269_010 0.1043306286 - - hypothetical protein JCGZ_21552 [Jatropha curcas]
9 Hb_000614_190 0.1101450982 desease resistance Gene Name: ABC_membrane PREDICTED: putative ABC transporter C family member 15 [Jatropha curcas]
10 Hb_004324_220 0.1106820523 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
11 Hb_005569_030 0.1119651133 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Jatropha curcas]
12 Hb_174101_010 0.1130610171 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
13 Hb_000313_100 0.1136447091 rubber biosynthesis Gene Name: CPT4 PREDICTED: rubber cis-polyprenyltransferase HRT2 [Jatropha curcas]
14 Hb_000472_020 0.1167754856 - - PREDICTED: uncharacterized protein LOC105641103 [Jatropha curcas]
15 Hb_114310_050 0.1176376107 - - Iron(III)-zinc(II) purple acid phosphatase precursor family protein [Populus trichocarpa]
16 Hb_001013_050 0.1192408902 - - unnamed protein product [Coffea canephora]
17 Hb_044624_010 0.1199607686 - - -
18 Hb_001153_090 0.1219889687 - - PREDICTED: protein FAM63A [Jatropha curcas]
19 Hb_000215_290 0.1226679717 transcription factor TF Family: NAC PREDICTED: protein BEARSKIN2 isoform X2 [Jatropha curcas]
20 Hb_004143_140 0.1258322363 - - glycosyltransferase, partial [Arabidopsis thaliana]

Gene co-expression network

sample Hb_003562_040 Hb_003562_040 Hb_005034_010 Hb_005034_010 Hb_003562_040--Hb_005034_010 Hb_001174_030 Hb_001174_030 Hb_003562_040--Hb_001174_030 Hb_005054_280 Hb_005054_280 Hb_003562_040--Hb_005054_280 Hb_005074_010 Hb_005074_010 Hb_003562_040--Hb_005074_010 Hb_175670_010 Hb_175670_010 Hb_003562_040--Hb_175670_010 Hb_007007_090 Hb_007007_090 Hb_003562_040--Hb_007007_090 Hb_005034_010--Hb_001174_030 Hb_005034_010--Hb_005054_280 Hb_174101_010 Hb_174101_010 Hb_005034_010--Hb_174101_010 Hb_000614_190 Hb_000614_190 Hb_005034_010--Hb_000614_190 Hb_003835_030 Hb_003835_030 Hb_005034_010--Hb_003835_030 Hb_001544_070 Hb_001544_070 Hb_001174_030--Hb_001544_070 Hb_001706_020 Hb_001706_020 Hb_001174_030--Hb_001706_020 Hb_001174_030--Hb_174101_010 Hb_000472_020 Hb_000472_020 Hb_001174_030--Hb_000472_020 Hb_007420_020 Hb_007420_020 Hb_005054_280--Hb_007420_020 Hb_114310_050 Hb_114310_050 Hb_005054_280--Hb_114310_050 Hb_005054_280--Hb_000614_190 Hb_008111_010 Hb_008111_010 Hb_005054_280--Hb_008111_010 Hb_001913_030 Hb_001913_030 Hb_005074_010--Hb_001913_030 Hb_002335_010 Hb_002335_010 Hb_005074_010--Hb_002335_010 Hb_007257_070 Hb_007257_070 Hb_005074_010--Hb_007257_070 Hb_028928_020 Hb_028928_020 Hb_005074_010--Hb_028928_020 Hb_005074_010--Hb_007007_090 Hb_000313_100 Hb_000313_100 Hb_175670_010--Hb_000313_100 Hb_005569_030 Hb_005569_030 Hb_175670_010--Hb_005569_030 Hb_004324_220 Hb_004324_220 Hb_175670_010--Hb_004324_220 Hb_044624_010 Hb_044624_010 Hb_175670_010--Hb_044624_010 Hb_001046_040 Hb_001046_040 Hb_175670_010--Hb_001046_040 Hb_002375_080 Hb_002375_080 Hb_007007_090--Hb_002375_080 Hb_001248_170 Hb_001248_170 Hb_007007_090--Hb_001248_170 Hb_001677_120 Hb_001677_120 Hb_007007_090--Hb_001677_120 Hb_000589_330 Hb_000589_330 Hb_007007_090--Hb_000589_330 Hb_006573_280 Hb_006573_280 Hb_007007_090--Hb_006573_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.274058 0.09815 0.170355 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0930028 0.186974

CAGE analysis