Hb_044624_010

Information

Type -
Description -
Location Contig44624: 976-3439
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_044624_010 0.0 - - -
2 Hb_004324_220 0.0470377055 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
3 Hb_001046_040 0.0652958812 - - UDP-glucosyltransferase, putative [Ricinus communis]
4 Hb_022487_010 0.0797822677 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
5 Hb_175670_010 0.0908784217 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
6 Hb_115114_010 0.0943076893 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000813_090 0.0992226151 - - hypothetical protein CARUB_v10019318mg [Capsella rubella]
8 Hb_004143_140 0.1022706615 - - glycosyltransferase, partial [Arabidopsis thaliana]
9 Hb_005074_010 0.1129831946 - - PREDICTED: uncharacterized protein LOC105644456 [Jatropha curcas]
10 Hb_000313_100 0.1136092096 rubber biosynthesis Gene Name: CPT4 PREDICTED: rubber cis-polyprenyltransferase HRT2 [Jatropha curcas]
11 Hb_005271_180 0.1176570461 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
12 Hb_003562_040 0.1199607686 - - PREDICTED: septum-promoting GTP-binding protein 1-like [Jatropha curcas]
13 Hb_000049_290 0.121639996 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 1 [Jatropha curcas]
14 Hb_000140_220 0.1220517574 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 22 [Jatropha curcas]
15 Hb_001989_080 0.1249725413 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_132259_010 0.126988119 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]
17 Hb_000363_050 0.1274759044 - - PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform X2 [Jatropha curcas]
18 Hb_027474_010 0.1295427429 - - PREDICTED: uncharacterized protein LOC105629982 [Jatropha curcas]
19 Hb_001821_050 0.1368799628 - - hypothetical protein CICLE_v10032084mg [Citrus clementina]
20 Hb_000015_230 0.1376810621 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.6-like isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_044624_010 Hb_044624_010 Hb_004324_220 Hb_004324_220 Hb_044624_010--Hb_004324_220 Hb_001046_040 Hb_001046_040 Hb_044624_010--Hb_001046_040 Hb_022487_010 Hb_022487_010 Hb_044624_010--Hb_022487_010 Hb_175670_010 Hb_175670_010 Hb_044624_010--Hb_175670_010 Hb_115114_010 Hb_115114_010 Hb_044624_010--Hb_115114_010 Hb_000813_090 Hb_000813_090 Hb_044624_010--Hb_000813_090 Hb_004324_220--Hb_022487_010 Hb_004324_220--Hb_175670_010 Hb_004324_220--Hb_001046_040 Hb_000049_290 Hb_000049_290 Hb_004324_220--Hb_000049_290 Hb_000313_100 Hb_000313_100 Hb_004324_220--Hb_000313_100 Hb_001046_040--Hb_000813_090 Hb_001046_040--Hb_115114_010 Hb_001046_040--Hb_175670_010 Hb_004143_140 Hb_004143_140 Hb_001046_040--Hb_004143_140 Hb_022487_010--Hb_000049_290 Hb_000427_040 Hb_000427_040 Hb_022487_010--Hb_000427_040 Hb_032779_010 Hb_032779_010 Hb_022487_010--Hb_032779_010 Hb_000140_220 Hb_000140_220 Hb_022487_010--Hb_000140_220 Hb_175670_010--Hb_000313_100 Hb_005569_030 Hb_005569_030 Hb_175670_010--Hb_005569_030 Hb_003562_040 Hb_003562_040 Hb_175670_010--Hb_003562_040 Hb_132259_010 Hb_132259_010 Hb_115114_010--Hb_132259_010 Hb_004879_030 Hb_004879_030 Hb_115114_010--Hb_004879_030 Hb_115114_010--Hb_000140_220 Hb_115114_010--Hb_000813_090 Hb_026415_010 Hb_026415_010 Hb_000813_090--Hb_026415_010 Hb_009557_080 Hb_009557_080 Hb_000813_090--Hb_009557_080 Hb_000041_160 Hb_000041_160 Hb_000813_090--Hb_000041_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.3928 0.412892 0.709219 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.18152 1.13418

CAGE analysis