Hb_026415_010

Information

Type -
Description -
Location Contig26415: 8668-9689
Sequence    

Annotation

kegg
ID pop:POPTR_0017s09520g
description hypothetical protein
nr
ID XP_012066187.1
description PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067LE94
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23767 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27676: 8725-9463
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026415_010 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
2 Hb_000325_070 0.0730041986 - - ABC transporter family protein [Hevea brasiliensis]
3 Hb_004879_030 0.0777942055 - - PREDICTED: uncharacterized protein LOC105124685 [Populus euphratica]
4 Hb_009403_010 0.0966374199 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
5 Hb_000813_090 0.1021149453 - - hypothetical protein CARUB_v10019318mg [Capsella rubella]
6 Hb_115114_010 0.1126794096 - - conserved hypothetical protein [Ricinus communis]
7 Hb_152414_010 0.113664683 desease resistance Gene Name: NB-ARC hypothetical protein PRUPE_ppa024232mg [Prunus persica]
8 Hb_009557_080 0.1173574397 - - PREDICTED: glutaredoxin-C9-like [Populus euphratica]
9 Hb_000375_150 0.1177905316 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000181_390 0.1194221256 - - unknown [Lotus japonicus]
11 Hb_000060_100 0.1202619347 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
12 Hb_004724_300 0.1213979937 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
13 Hb_001046_040 0.1283598212 - - UDP-glucosyltransferase, putative [Ricinus communis]
14 Hb_001821_050 0.1294582773 - - hypothetical protein CICLE_v10032084mg [Citrus clementina]
15 Hb_001677_120 0.1316017534 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
16 Hb_004945_050 0.1329245017 transcription factor TF Family: C2C2-Dof hypothetical protein POPTR_0008s08740g [Populus trichocarpa]
17 Hb_000015_230 0.1362605312 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.6-like isoform X2 [Populus euphratica]
18 Hb_132259_010 0.1368893573 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]
19 Hb_160576_010 0.139235475 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
20 Hb_002725_080 0.1398922683 - - protein phosphatase 2c, putative [Ricinus communis]

Gene co-expression network

sample Hb_026415_010 Hb_026415_010 Hb_000325_070 Hb_000325_070 Hb_026415_010--Hb_000325_070 Hb_004879_030 Hb_004879_030 Hb_026415_010--Hb_004879_030 Hb_009403_010 Hb_009403_010 Hb_026415_010--Hb_009403_010 Hb_000813_090 Hb_000813_090 Hb_026415_010--Hb_000813_090 Hb_115114_010 Hb_115114_010 Hb_026415_010--Hb_115114_010 Hb_152414_010 Hb_152414_010 Hb_026415_010--Hb_152414_010 Hb_005694_150 Hb_005694_150 Hb_000325_070--Hb_005694_150 Hb_000375_150 Hb_000375_150 Hb_000325_070--Hb_000375_150 Hb_000325_070--Hb_004879_030 Hb_004724_300 Hb_004724_300 Hb_000325_070--Hb_004724_300 Hb_000015_230 Hb_000015_230 Hb_000325_070--Hb_000015_230 Hb_004879_030--Hb_152414_010 Hb_004879_030--Hb_115114_010 Hb_009557_080 Hb_009557_080 Hb_004879_030--Hb_009557_080 Hb_006358_030 Hb_006358_030 Hb_004879_030--Hb_006358_030 Hb_009403_010--Hb_004879_030 Hb_009403_010--Hb_000813_090 Hb_000974_030 Hb_000974_030 Hb_009403_010--Hb_000974_030 Hb_009403_010--Hb_000325_070 Hb_105814_020 Hb_105814_020 Hb_009403_010--Hb_105814_020 Hb_001046_040 Hb_001046_040 Hb_000813_090--Hb_001046_040 Hb_000813_090--Hb_115114_010 Hb_044624_010 Hb_044624_010 Hb_000813_090--Hb_044624_010 Hb_000813_090--Hb_009557_080 Hb_000041_160 Hb_000041_160 Hb_000813_090--Hb_000041_160 Hb_132259_010 Hb_132259_010 Hb_115114_010--Hb_132259_010 Hb_115114_010--Hb_001046_040 Hb_115114_010--Hb_044624_010 Hb_000140_220 Hb_000140_220 Hb_115114_010--Hb_000140_220 Hb_152414_010--Hb_006358_030 Hb_152414_010--Hb_115114_010 Hb_036492_020 Hb_036492_020 Hb_152414_010--Hb_036492_020 Hb_003929_040 Hb_003929_040 Hb_152414_010--Hb_003929_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.28577 0.310719 0.620507 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0172306 0.522951

CAGE analysis