Hb_006358_030

Information

Type -
Description -
Location Contig6358: 34425-37518
Sequence    

Annotation

kegg
ID pop:POPTR_0007s02250g
description hypothetical protein
nr
ID KDP42829.1
description hypothetical protein JCGZ_23771 [Jatropha curcas]
swissprot
ID Q3ECH2
description Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2
trembl
ID A0A067LFF9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23771 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51957: 34540-34838
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006358_030 0.0 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
2 Hb_036492_020 0.0683522387 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
3 Hb_000032_590 0.0744717087 - - PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Jatropha curcas]
4 Hb_002030_100 0.0922467676 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]
5 Hb_152414_010 0.1018229204 desease resistance Gene Name: NB-ARC hypothetical protein PRUPE_ppa024232mg [Prunus persica]
6 Hb_005772_020 0.1092650494 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
7 Hb_004879_030 0.1095777321 - - PREDICTED: uncharacterized protein LOC105124685 [Populus euphratica]
8 Hb_000656_260 0.1115806521 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
9 Hb_003929_040 0.1118408947 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
10 Hb_004109_150 0.1150630045 - - glutathione-S-transferase tau 1 [Hevea brasiliensis]
11 Hb_115114_010 0.1154650134 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000402_180 0.1212621413 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
13 Hb_005240_010 0.1271595949 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
14 Hb_132259_010 0.1318681183 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]
15 Hb_010175_050 0.1339641303 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
16 Hb_003073_040 0.1347501342 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.6-like isoform X2 [Populus euphratica]
17 Hb_000140_220 0.138272412 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 22 [Jatropha curcas]
18 Hb_134022_010 0.139513862 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
19 Hb_171900_110 0.1409505174 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT3-like [Populus euphratica]
20 Hb_012799_040 0.1429405278 - - PREDICTED: transmembrane ascorbate ferrireductase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_006358_030 Hb_006358_030 Hb_036492_020 Hb_036492_020 Hb_006358_030--Hb_036492_020 Hb_000032_590 Hb_000032_590 Hb_006358_030--Hb_000032_590 Hb_002030_100 Hb_002030_100 Hb_006358_030--Hb_002030_100 Hb_152414_010 Hb_152414_010 Hb_006358_030--Hb_152414_010 Hb_005772_020 Hb_005772_020 Hb_006358_030--Hb_005772_020 Hb_004879_030 Hb_004879_030 Hb_006358_030--Hb_004879_030 Hb_000402_180 Hb_000402_180 Hb_036492_020--Hb_000402_180 Hb_000656_260 Hb_000656_260 Hb_036492_020--Hb_000656_260 Hb_134022_010 Hb_134022_010 Hb_036492_020--Hb_134022_010 Hb_003929_040 Hb_003929_040 Hb_036492_020--Hb_003929_040 Hb_036492_020--Hb_152414_010 Hb_171900_110 Hb_171900_110 Hb_000032_590--Hb_171900_110 Hb_005240_010 Hb_005240_010 Hb_000032_590--Hb_005240_010 Hb_000032_590--Hb_005772_020 Hb_115114_010 Hb_115114_010 Hb_000032_590--Hb_115114_010 Hb_132259_010 Hb_132259_010 Hb_000032_590--Hb_132259_010 Hb_004109_150 Hb_004109_150 Hb_002030_100--Hb_004109_150 Hb_002030_100--Hb_036492_020 Hb_002030_100--Hb_000032_590 Hb_002030_100--Hb_000656_260 Hb_003073_040 Hb_003073_040 Hb_002030_100--Hb_003073_040 Hb_152414_010--Hb_004879_030 Hb_152414_010--Hb_115114_010 Hb_026415_010 Hb_026415_010 Hb_152414_010--Hb_026415_010 Hb_152414_010--Hb_003929_040 Hb_005772_020--Hb_005240_010 Hb_010175_050 Hb_010175_050 Hb_005772_020--Hb_010175_050 Hb_005772_020--Hb_171900_110 Hb_000230_250 Hb_000230_250 Hb_005772_020--Hb_000230_250 Hb_004879_030--Hb_026415_010 Hb_004879_030--Hb_115114_010 Hb_000325_070 Hb_000325_070 Hb_004879_030--Hb_000325_070 Hb_009557_080 Hb_009557_080 Hb_004879_030--Hb_009557_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.13015 1.21706 0.702539 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0199703 1.41178

CAGE analysis