Hb_000656_260

Information

Type -
Description -
Location Contig656: 189601-190095
Sequence    

Annotation

kegg
ID rcu:RCOM_0391580
description hypothetical protein
nr
ID XP_012068864.1
description PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KX03
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24681 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52737: 188732-190354
cDNA
(Sanger)
(ID:Location)		 031_E03.ab1: 188743-189957

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000656_260 0.0 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
2 Hb_012799_040 0.0683025691 - - PREDICTED: transmembrane ascorbate ferrireductase 1 [Jatropha curcas]
3 Hb_036492_020 0.0793366725 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
4 Hb_029584_110 0.0807344279 transcription factor TF Family: MYB-related PREDICTED: myb-like protein J [Jatropha curcas]
5 Hb_006358_030 0.1115806521 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
6 Hb_000402_180 0.1118190744 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
7 Hb_002999_130 0.1180782596 transcription factor TF Family: C2C2-Dof hypothetical protein POPTR_0008s08740g [Populus trichocarpa]
8 Hb_183025_010 0.1190566407 - - PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Jatropha curcas]
9 Hb_003029_010 0.1194272897 transcription factor TF Family: WRKY conserved hypothetical protein [Ricinus communis]
10 Hb_002030_100 0.1229638337 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]
11 Hb_073171_050 0.1243004446 transcription factor TF Family: MYB-related PREDICTED: myb-like protein H [Jatropha curcas]
12 Hb_004393_030 0.1255445467 - - CBL-interacting protein kinase 6 [Populus trichocarpa]
13 Hb_004109_150 0.1269542321 - - glutathione-S-transferase tau 1 [Hevea brasiliensis]
14 Hb_001821_050 0.1277021827 - - hypothetical protein CICLE_v10032084mg [Citrus clementina]
15 Hb_008202_010 0.1279921895 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
16 Hb_000110_040 0.1283786634 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 [Jatropha curcas]
17 Hb_134022_010 0.1284851719 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
18 Hb_001660_130 0.1304143212 - - PREDICTED: serine/threonine-protein kinase-like protein CCR4 [Jatropha curcas]
19 Hb_010180_050 0.1315002765 - - PREDICTED: CBL-interacting protein kinase 2 [Jatropha curcas]
20 Hb_008810_030 0.1322747856 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000656_260 Hb_000656_260 Hb_012799_040 Hb_012799_040 Hb_000656_260--Hb_012799_040 Hb_036492_020 Hb_036492_020 Hb_000656_260--Hb_036492_020 Hb_029584_110 Hb_029584_110 Hb_000656_260--Hb_029584_110 Hb_006358_030 Hb_006358_030 Hb_000656_260--Hb_006358_030 Hb_000402_180 Hb_000402_180 Hb_000656_260--Hb_000402_180 Hb_002999_130 Hb_002999_130 Hb_000656_260--Hb_002999_130 Hb_000032_090 Hb_000032_090 Hb_012799_040--Hb_000032_090 Hb_004393_030 Hb_004393_030 Hb_012799_040--Hb_004393_030 Hb_012799_040--Hb_036492_020 Hb_001660_130 Hb_001660_130 Hb_012799_040--Hb_001660_130 Hb_012799_040--Hb_029584_110 Hb_036492_020--Hb_006358_030 Hb_036492_020--Hb_000402_180 Hb_134022_010 Hb_134022_010 Hb_036492_020--Hb_134022_010 Hb_003929_040 Hb_003929_040 Hb_036492_020--Hb_003929_040 Hb_152414_010 Hb_152414_010 Hb_036492_020--Hb_152414_010 Hb_003029_010 Hb_003029_010 Hb_029584_110--Hb_003029_010 Hb_008202_010 Hb_008202_010 Hb_029584_110--Hb_008202_010 Hb_002596_090 Hb_002596_090 Hb_029584_110--Hb_002596_090 Hb_183025_010 Hb_183025_010 Hb_029584_110--Hb_183025_010 Hb_026016_010 Hb_026016_010 Hb_029584_110--Hb_026016_010 Hb_000032_590 Hb_000032_590 Hb_006358_030--Hb_000032_590 Hb_002030_100 Hb_002030_100 Hb_006358_030--Hb_002030_100 Hb_006358_030--Hb_152414_010 Hb_005772_020 Hb_005772_020 Hb_006358_030--Hb_005772_020 Hb_004879_030 Hb_004879_030 Hb_006358_030--Hb_004879_030 Hb_000402_180--Hb_134022_010 Hb_000402_180--Hb_003929_040 Hb_070613_010 Hb_070613_010 Hb_000402_180--Hb_070613_010 Hb_000402_180--Hb_001660_130 Hb_008810_030 Hb_008810_030 Hb_000402_180--Hb_008810_030 Hb_073171_050 Hb_073171_050 Hb_002999_130--Hb_073171_050 Hb_000594_150 Hb_000594_150 Hb_002999_130--Hb_000594_150 Hb_010180_050 Hb_010180_050 Hb_002999_130--Hb_010180_050 Hb_004800_140 Hb_004800_140 Hb_002999_130--Hb_004800_140 Hb_001369_020 Hb_001369_020 Hb_002999_130--Hb_001369_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.13291 94.6218 70.3647 34.6538 0.17231 0.220242
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.409361 0.107197 0.181226 7.13698 58.3853

CAGE analysis