Hb_004800_140

Information

Type -
Description -
Location Contig4800: 106816-110279
Sequence    

Annotation

kegg
ID rcu:RCOM_0536940
description hypothetical protein
nr
ID XP_012072036.1
description PREDICTED: uncharacterized protein LOC105633940 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L1E1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05186 PE=4 SV=1
Gene Ontology
ID GO:0016021
description sulfite exporter family isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004800_140 0.0 - - PREDICTED: uncharacterized protein LOC105633940 isoform X1 [Jatropha curcas]
2 Hb_004241_170 0.103119955 - - PREDICTED: uncharacterized protein LOC105633220 [Jatropha curcas]
3 Hb_002999_130 0.1229471424 transcription factor TF Family: C2C2-Dof hypothetical protein POPTR_0008s08740g [Populus trichocarpa]
4 Hb_008341_010 0.1240467758 transcription factor TF Family: Orphans PREDICTED: zinc finger protein HD1-like isoform X2 [Jatropha curcas]
5 Hb_000340_380 0.127139587 - - PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Jatropha curcas]
6 Hb_001631_110 0.1272567255 - - PREDICTED: LOW QUALITY PROTEIN: gamma-glutamyltranspeptidase 1-like [Populus euphratica]
7 Hb_000732_160 0.1287413691 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
8 Hb_010175_050 0.1374232777 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
9 Hb_000110_040 0.140631961 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 [Jatropha curcas]
10 Hb_010614_010 0.1432353531 - - leucine-rich repeat transmembrane protein kinase [Populus trichocarpa]
11 Hb_000656_260 0.14333204 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
12 Hb_008202_010 0.1482905714 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
13 Hb_001369_020 0.149534755 - - PREDICTED: U-box domain-containing protein 35-like [Jatropha curcas]
14 Hb_010180_050 0.1504543573 - - PREDICTED: CBL-interacting protein kinase 2 [Jatropha curcas]
15 Hb_183025_010 0.1524372985 - - PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Jatropha curcas]
16 Hb_000230_250 0.153479201 - - PREDICTED: pyruvate, phosphate dikinase, chloroplastic [Jatropha curcas]
17 Hb_029584_110 0.1559144425 transcription factor TF Family: MYB-related PREDICTED: myb-like protein J [Jatropha curcas]
18 Hb_073171_050 0.1562923019 transcription factor TF Family: MYB-related PREDICTED: myb-like protein H [Jatropha curcas]
19 Hb_010904_010 0.1569579544 - - PREDICTED: probable receptor-like protein kinase At5g39030 isoform X2 [Jatropha curcas]
20 Hb_002596_090 0.1643381988 - - PREDICTED: calcium-transporting ATPase 4, plasma membrane-type-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004800_140 Hb_004800_140 Hb_004241_170 Hb_004241_170 Hb_004800_140--Hb_004241_170 Hb_002999_130 Hb_002999_130 Hb_004800_140--Hb_002999_130 Hb_008341_010 Hb_008341_010 Hb_004800_140--Hb_008341_010 Hb_000340_380 Hb_000340_380 Hb_004800_140--Hb_000340_380 Hb_001631_110 Hb_001631_110 Hb_004800_140--Hb_001631_110 Hb_000732_160 Hb_000732_160 Hb_004800_140--Hb_000732_160 Hb_004241_170--Hb_008341_010 Hb_004241_170--Hb_001631_110 Hb_010091_030 Hb_010091_030 Hb_004241_170--Hb_010091_030 Hb_004241_170--Hb_000732_160 Hb_010175_050 Hb_010175_050 Hb_004241_170--Hb_010175_050 Hb_073171_050 Hb_073171_050 Hb_002999_130--Hb_073171_050 Hb_000594_150 Hb_000594_150 Hb_002999_130--Hb_000594_150 Hb_000656_260 Hb_000656_260 Hb_002999_130--Hb_000656_260 Hb_010180_050 Hb_010180_050 Hb_002999_130--Hb_010180_050 Hb_001369_020 Hb_001369_020 Hb_002999_130--Hb_001369_020 Hb_008341_010--Hb_001631_110 Hb_008341_010--Hb_010091_030 Hb_008341_010--Hb_010175_050 Hb_008341_010--Hb_000732_160 Hb_031685_010 Hb_031685_010 Hb_000340_380--Hb_031685_010 Hb_004109_270 Hb_004109_270 Hb_000340_380--Hb_004109_270 Hb_010904_010 Hb_010904_010 Hb_000340_380--Hb_010904_010 Hb_008202_010 Hb_008202_010 Hb_000340_380--Hb_008202_010 Hb_000340_380--Hb_000732_160 Hb_001631_110--Hb_000732_160 Hb_001631_110--Hb_010091_030 Hb_017098_020 Hb_017098_020 Hb_001631_110--Hb_017098_020 Hb_010614_010 Hb_010614_010 Hb_000732_160--Hb_010614_010 Hb_000732_160--Hb_031685_010 Hb_094439_010 Hb_094439_010 Hb_000732_160--Hb_094439_010 Hb_000732_160--Hb_010904_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0136666 7.28293 6.8454 1.12299 0.0803714 0.0136872
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0934003 0.0489871 0.230116 0.694131 5.12475

CAGE analysis