Hb_010091_030

Information

Type -
Description -
Location Contig10091: 7970-15224
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa014877mg
description hypothetical protein
nr
ID XP_012077051.1
description PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
swissprot
ID Q39214
description Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1
trembl
ID A0A067LB31
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17219 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010091_030 0.0 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
2 Hb_008341_010 0.078406201 transcription factor TF Family: Orphans PREDICTED: zinc finger protein HD1-like isoform X2 [Jatropha curcas]
3 Hb_004241_170 0.0992384794 - - PREDICTED: uncharacterized protein LOC105633220 [Jatropha curcas]
4 Hb_001631_110 0.1180446079 - - PREDICTED: LOW QUALITY PROTEIN: gamma-glutamyltranspeptidase 1-like [Populus euphratica]
5 Hb_003811_030 0.1363164614 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
6 Hb_010175_050 0.138795528 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
7 Hb_164146_020 0.1490551036 - - metal ion binding protein, putative [Ricinus communis]
8 Hb_004800_140 0.1655529966 - - PREDICTED: uncharacterized protein LOC105633940 isoform X1 [Jatropha curcas]
9 Hb_000732_160 0.1725141675 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
10 Hb_019026_040 0.1756130179 - - S-locus lectin protein kinase family protein [Theobroma cacao]
11 Hb_000402_180 0.1821204212 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
12 Hb_008202_020 0.1886535144 - - receptor serine/threonine kinase, putative [Ricinus communis]
13 Hb_001247_010 0.1887141604 - - galactinol synthase [Manihot esculenta]
14 Hb_036492_020 0.1896261821 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
15 Hb_004880_100 0.1902922668 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300-like [Glycine max]
16 Hb_017098_020 0.1922139035 - - Zinc finger protein GIS2 [Medicago truncatula]
17 Hb_002010_020 0.1994931858 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Jatropha curcas]
18 Hb_006907_020 0.1998271218 - - 1-amino-cyclopropane-1-carboxylic acid oxidase 3 [Manihot esculenta]
19 Hb_004899_360 0.2012084421 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
20 Hb_000465_100 0.2024747838 - - catalytic, putative [Ricinus communis]

Gene co-expression network

sample Hb_010091_030 Hb_010091_030 Hb_008341_010 Hb_008341_010 Hb_010091_030--Hb_008341_010 Hb_004241_170 Hb_004241_170 Hb_010091_030--Hb_004241_170 Hb_001631_110 Hb_001631_110 Hb_010091_030--Hb_001631_110 Hb_003811_030 Hb_003811_030 Hb_010091_030--Hb_003811_030 Hb_010175_050 Hb_010175_050 Hb_010091_030--Hb_010175_050 Hb_164146_020 Hb_164146_020 Hb_010091_030--Hb_164146_020 Hb_008341_010--Hb_004241_170 Hb_008341_010--Hb_001631_110 Hb_008341_010--Hb_010175_050 Hb_004800_140 Hb_004800_140 Hb_008341_010--Hb_004800_140 Hb_000732_160 Hb_000732_160 Hb_008341_010--Hb_000732_160 Hb_004241_170--Hb_001631_110 Hb_004241_170--Hb_004800_140 Hb_004241_170--Hb_000732_160 Hb_004241_170--Hb_010175_050 Hb_001631_110--Hb_000732_160 Hb_001631_110--Hb_004800_140 Hb_017098_020 Hb_017098_020 Hb_001631_110--Hb_017098_020 Hb_006873_030 Hb_006873_030 Hb_003811_030--Hb_006873_030 Hb_019026_040 Hb_019026_040 Hb_003811_030--Hb_019026_040 Hb_107552_020 Hb_107552_020 Hb_003811_030--Hb_107552_020 Hb_003929_040 Hb_003929_040 Hb_003811_030--Hb_003929_040 Hb_036492_020 Hb_036492_020 Hb_003811_030--Hb_036492_020 Hb_003811_030--Hb_010175_050 Hb_005772_020 Hb_005772_020 Hb_010175_050--Hb_005772_020 Hb_010175_050--Hb_019026_040 Hb_000230_250 Hb_000230_250 Hb_010175_050--Hb_000230_250 Hb_006615_060 Hb_006615_060 Hb_164146_020--Hb_006615_060 Hb_001310_010 Hb_001310_010 Hb_164146_020--Hb_001310_010 Hb_008202_020 Hb_008202_020 Hb_164146_020--Hb_008202_020 Hb_120011_010 Hb_120011_010 Hb_164146_020--Hb_120011_010 Hb_086614_010 Hb_086614_010 Hb_164146_020--Hb_086614_010 Hb_002311_160 Hb_002311_160 Hb_164146_020--Hb_002311_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.270748 0.195276 0.0132782 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0123963 0.0991984

CAGE analysis