Hb_036492_020

Information

Type -
Description -
Location Contig36492: 6827-8132
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa001076mg
description hypothetical protein
nr
ID XP_012077051.1
description PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
swissprot
ID Q39214
description Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1
trembl
ID A0A067LB31
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17219 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036492_020 0.0 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
2 Hb_006358_030 0.0683522387 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
3 Hb_000402_180 0.0717797717 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
4 Hb_000656_260 0.0793366725 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]
5 Hb_134022_010 0.0903145575 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
6 Hb_003929_040 0.0985467058 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
7 Hb_152414_010 0.1085998905 desease resistance Gene Name: NB-ARC hypothetical protein PRUPE_ppa024232mg [Prunus persica]
8 Hb_012799_040 0.108885878 - - PREDICTED: transmembrane ascorbate ferrireductase 1 [Jatropha curcas]
9 Hb_002030_100 0.1116019006 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]
10 Hb_003811_030 0.1177538644 - - hypothetical protein JCGZ_01307 [Jatropha curcas]
11 Hb_001821_050 0.1193057945 - - hypothetical protein CICLE_v10032084mg [Citrus clementina]
12 Hb_029584_110 0.1194814455 transcription factor TF Family: MYB-related PREDICTED: myb-like protein J [Jatropha curcas]
13 Hb_000032_590 0.1229053889 - - PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Jatropha curcas]
14 Hb_008810_030 0.1266669099 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
15 Hb_004109_150 0.1271327251 - - glutathione-S-transferase tau 1 [Hevea brasiliensis]
16 Hb_070613_010 0.1292946974 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
17 Hb_004724_300 0.1302711809 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
18 Hb_019026_040 0.1304709837 - - S-locus lectin protein kinase family protein [Theobroma cacao]
19 Hb_004879_030 0.1305047231 - - PREDICTED: uncharacterized protein LOC105124685 [Populus euphratica]
20 Hb_010175_050 0.1307177042 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]

Gene co-expression network

sample Hb_036492_020 Hb_036492_020 Hb_006358_030 Hb_006358_030 Hb_036492_020--Hb_006358_030 Hb_000402_180 Hb_000402_180 Hb_036492_020--Hb_000402_180 Hb_000656_260 Hb_000656_260 Hb_036492_020--Hb_000656_260 Hb_134022_010 Hb_134022_010 Hb_036492_020--Hb_134022_010 Hb_003929_040 Hb_003929_040 Hb_036492_020--Hb_003929_040 Hb_152414_010 Hb_152414_010 Hb_036492_020--Hb_152414_010 Hb_000032_590 Hb_000032_590 Hb_006358_030--Hb_000032_590 Hb_002030_100 Hb_002030_100 Hb_006358_030--Hb_002030_100 Hb_006358_030--Hb_152414_010 Hb_005772_020 Hb_005772_020 Hb_006358_030--Hb_005772_020 Hb_004879_030 Hb_004879_030 Hb_006358_030--Hb_004879_030 Hb_000402_180--Hb_134022_010 Hb_000402_180--Hb_003929_040 Hb_070613_010 Hb_070613_010 Hb_000402_180--Hb_070613_010 Hb_001660_130 Hb_001660_130 Hb_000402_180--Hb_001660_130 Hb_008810_030 Hb_008810_030 Hb_000402_180--Hb_008810_030 Hb_012799_040 Hb_012799_040 Hb_000656_260--Hb_012799_040 Hb_029584_110 Hb_029584_110 Hb_000656_260--Hb_029584_110 Hb_000656_260--Hb_006358_030 Hb_000656_260--Hb_000402_180 Hb_002999_130 Hb_002999_130 Hb_000656_260--Hb_002999_130 Hb_004724_300 Hb_004724_300 Hb_134022_010--Hb_004724_300 Hb_134022_010--Hb_008810_030 Hb_001821_050 Hb_001821_050 Hb_134022_010--Hb_001821_050 Hb_004393_030 Hb_004393_030 Hb_134022_010--Hb_004393_030 Hb_003929_040--Hb_006358_030 Hb_003811_030 Hb_003811_030 Hb_003929_040--Hb_003811_030 Hb_003929_040--Hb_070613_010 Hb_003929_040--Hb_134022_010 Hb_152414_010--Hb_004879_030 Hb_115114_010 Hb_115114_010 Hb_152414_010--Hb_115114_010 Hb_026415_010 Hb_026415_010 Hb_152414_010--Hb_026415_010 Hb_152414_010--Hb_003929_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.51513 2.10386 1.0705 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.103383 1.74317

CAGE analysis