Hb_000032_590

Information

Type -
Description -
Location Contig32: 442820-443929
Sequence    

Annotation

kegg
ID rcu:RCOM_1311790
description electron transporter, putative
nr
ID XP_012086699.1
description PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Jatropha curcas]
swissprot
ID Q9FLE8
description Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=2 SV=1
trembl
ID A0A067JMT3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20437 PE=4 SV=1
Gene Ontology
ID GO:0009055
description glutaredoxin domain-containing cysteine-rich protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33773: 442723-444213
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_590 0.0 - - PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Jatropha curcas]
2 Hb_171900_110 0.0731499281 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT3-like [Populus euphratica]
3 Hb_006358_030 0.0744717087 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
4 Hb_005240_010 0.0787765865 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
5 Hb_005772_020 0.0858233862 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
6 Hb_115114_010 0.1158265589 - - conserved hypothetical protein [Ricinus communis]
7 Hb_132259_010 0.1201968232 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]
8 Hb_000780_160 0.1214118512 - - hypothetical protein RCOM_0483300 [Ricinus communis]
9 Hb_002030_100 0.1219318636 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]
10 Hb_036492_020 0.1229053889 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
11 Hb_006243_010 0.1251676006 - - PREDICTED: cell wall protein IFF6 [Populus euphratica]
12 Hb_002211_020 0.1255148012 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 5-like [Jatropha curcas]
13 Hb_010175_050 0.1285563211 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
14 Hb_004126_050 0.1285769198 - - PREDICTED: L-type lectin-domain containing receptor kinase VII.1 [Tarenaya hassleriana]
15 Hb_152414_010 0.1307167897 desease resistance Gene Name: NB-ARC hypothetical protein PRUPE_ppa024232mg [Prunus persica]
16 Hb_000230_250 0.1341702538 - - PREDICTED: pyruvate, phosphate dikinase, chloroplastic [Jatropha curcas]
17 Hb_000112_040 0.13530976 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
18 Hb_010180_050 0.1380847182 - - PREDICTED: CBL-interacting protein kinase 2 [Jatropha curcas]
19 Hb_000039_120 0.1401182217 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
20 Hb_000656_260 0.1402514695 - - PREDICTED: uncharacterized protein LOC105631376 [Jatropha curcas]

Gene co-expression network

sample Hb_000032_590 Hb_000032_590 Hb_171900_110 Hb_171900_110 Hb_000032_590--Hb_171900_110 Hb_006358_030 Hb_006358_030 Hb_000032_590--Hb_006358_030 Hb_005240_010 Hb_005240_010 Hb_000032_590--Hb_005240_010 Hb_005772_020 Hb_005772_020 Hb_000032_590--Hb_005772_020 Hb_115114_010 Hb_115114_010 Hb_000032_590--Hb_115114_010 Hb_132259_010 Hb_132259_010 Hb_000032_590--Hb_132259_010 Hb_171900_110--Hb_005240_010 Hb_000780_160 Hb_000780_160 Hb_171900_110--Hb_000780_160 Hb_000112_040 Hb_000112_040 Hb_171900_110--Hb_000112_040 Hb_000039_120 Hb_000039_120 Hb_171900_110--Hb_000039_120 Hb_004126_050 Hb_004126_050 Hb_171900_110--Hb_004126_050 Hb_036492_020 Hb_036492_020 Hb_006358_030--Hb_036492_020 Hb_002030_100 Hb_002030_100 Hb_006358_030--Hb_002030_100 Hb_152414_010 Hb_152414_010 Hb_006358_030--Hb_152414_010 Hb_006358_030--Hb_005772_020 Hb_004879_030 Hb_004879_030 Hb_006358_030--Hb_004879_030 Hb_005240_010--Hb_005772_020 Hb_005240_010--Hb_004126_050 Hb_005240_010--Hb_000780_160 Hb_005240_010--Hb_006358_030 Hb_010175_050 Hb_010175_050 Hb_005772_020--Hb_010175_050 Hb_005772_020--Hb_171900_110 Hb_000230_250 Hb_000230_250 Hb_005772_020--Hb_000230_250 Hb_115114_010--Hb_132259_010 Hb_001046_040 Hb_001046_040 Hb_115114_010--Hb_001046_040 Hb_115114_010--Hb_004879_030 Hb_044624_010 Hb_044624_010 Hb_115114_010--Hb_044624_010 Hb_000140_220 Hb_000140_220 Hb_115114_010--Hb_000140_220 Hb_000813_090 Hb_000813_090 Hb_115114_010--Hb_000813_090 Hb_000015_230 Hb_000015_230 Hb_132259_010--Hb_000015_230 Hb_003073_040 Hb_003073_040 Hb_132259_010--Hb_003073_040 Hb_132259_010--Hb_004879_030 Hb_132259_010--Hb_000140_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.126631 428.789 213.522 116.651 0.0195475 0.237779
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.13371 0.0701148 0 7.66552 369.625

CAGE analysis