Hb_004126_050

Information

Type -
Description -
Location Contig4126: 67694-69769
Sequence    

Annotation

kegg
ID mus:103992774
description L-type lectin-domain containing receptor kinase VII.1-like
nr
ID XP_010529414.1
description PREDICTED: L-type lectin-domain containing receptor kinase VII.1 [Tarenaya hassleriana]
swissprot
ID Q9M345
description L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 PE=2 SV=1
trembl
ID A0A058ZU45
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L01538 PE=3 SV=1
Gene Ontology
ID GO:0004672
description l-type lectin-domain containing receptor kinase -like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004126_050 0.0 - - PREDICTED: L-type lectin-domain containing receptor kinase VII.1 [Tarenaya hassleriana]
2 Hb_006243_010 0.0328442034 - - PREDICTED: cell wall protein IFF6 [Populus euphratica]
3 Hb_000780_160 0.0689748095 - - hypothetical protein RCOM_0483300 [Ricinus communis]
4 Hb_005337_140 0.1121673648 - - PREDICTED: LOW QUALITY PROTEIN: wall-associated receptor kinase 1-like [Jatropha curcas]
5 Hb_005240_010 0.1189347159 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
6 Hb_171900_110 0.1207945028 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT3-like [Populus euphratica]
7 Hb_000061_440 0.1252108709 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
8 Hb_000032_590 0.1285769198 - - PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Jatropha curcas]
9 Hb_000186_180 0.1376820638 - - PREDICTED: uncharacterized protein LOC105649287 [Jatropha curcas]
10 Hb_019863_050 0.1397986123 - - PREDICTED: uncharacterized protein LOC103343426 [Prunus mume]
11 Hb_000039_120 0.1449047533 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
12 Hb_032202_010 0.1455721031 - - PREDICTED: subtilisin-like protease SBT1.1 [Jatropha curcas]
13 Hb_002211_020 0.1459653634 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 5-like [Jatropha curcas]
14 Hb_132259_010 0.1539850233 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]
15 Hb_003654_020 0.1541755244 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
16 Hb_003073_040 0.1567601928 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.6-like isoform X2 [Populus euphratica]
17 Hb_000167_100 0.1587785189 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_033363_030 0.1597351789 - - PREDICTED: serine/threonine-protein kinase STN7, chloroplastic [Jatropha curcas]
19 Hb_000668_180 0.1613917473 - - hypothetical protein POPTR_0005s16490g [Populus trichocarpa]
20 Hb_002400_260 0.161592296 - - catalytic, putative [Ricinus communis]

Gene co-expression network

sample Hb_004126_050 Hb_004126_050 Hb_006243_010 Hb_006243_010 Hb_004126_050--Hb_006243_010 Hb_000780_160 Hb_000780_160 Hb_004126_050--Hb_000780_160 Hb_005337_140 Hb_005337_140 Hb_004126_050--Hb_005337_140 Hb_005240_010 Hb_005240_010 Hb_004126_050--Hb_005240_010 Hb_171900_110 Hb_171900_110 Hb_004126_050--Hb_171900_110 Hb_000061_440 Hb_000061_440 Hb_004126_050--Hb_000061_440 Hb_006243_010--Hb_000780_160 Hb_006243_010--Hb_005337_140 Hb_000186_180 Hb_000186_180 Hb_006243_010--Hb_000186_180 Hb_006243_010--Hb_000061_440 Hb_019863_050 Hb_019863_050 Hb_006243_010--Hb_019863_050 Hb_000780_160--Hb_171900_110 Hb_000039_120 Hb_000039_120 Hb_000780_160--Hb_000039_120 Hb_000032_590 Hb_000032_590 Hb_000780_160--Hb_000032_590 Hb_000780_160--Hb_019863_050 Hb_002307_120 Hb_002307_120 Hb_005337_140--Hb_002307_120 Hb_031069_040 Hb_031069_040 Hb_005337_140--Hb_031069_040 Hb_003209_150 Hb_003209_150 Hb_005337_140--Hb_003209_150 Hb_033363_030 Hb_033363_030 Hb_005337_140--Hb_033363_030 Hb_003654_020 Hb_003654_020 Hb_005337_140--Hb_003654_020 Hb_005772_020 Hb_005772_020 Hb_005240_010--Hb_005772_020 Hb_005240_010--Hb_000032_590 Hb_005240_010--Hb_171900_110 Hb_005240_010--Hb_000780_160 Hb_006358_030 Hb_006358_030 Hb_005240_010--Hb_006358_030 Hb_171900_110--Hb_000032_590 Hb_000112_040 Hb_000112_040 Hb_171900_110--Hb_000112_040 Hb_171900_110--Hb_000039_120 Hb_004117_320 Hb_004117_320 Hb_000061_440--Hb_004117_320 Hb_005867_050 Hb_005867_050 Hb_000061_440--Hb_005867_050 Hb_004979_080 Hb_004979_080 Hb_000061_440--Hb_004979_080 Hb_000061_440--Hb_019863_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.56267 1.524 1.2996 0 0.00833916
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00677667 4.07356

CAGE analysis