Hb_005240_010

Information

Type transcription factor
Description TF Family: NAC
Location Contig5240: 4993-5737
Sequence    

Annotation

kegg
ID rcu:RCOM_0615030
description NAC domain-containing protein, putative
nr
ID XP_012090474.1
description PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
swissprot
ID Q8H4S4
description NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1
trembl
ID R4NEQ6
description NAC transcription factor 020 OS=Jatropha curcas GN=JCGZ_00057 PE=4 SV=1
Gene Ontology
ID GO:0005634
description nac domain-containing protein 68

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005240_010 0.0 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
2 Hb_005772_020 0.0684267574 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
3 Hb_000032_590 0.0787765865 - - PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Jatropha curcas]
4 Hb_171900_110 0.0792683376 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT3-like [Populus euphratica]
5 Hb_004126_050 0.1189347159 - - PREDICTED: L-type lectin-domain containing receptor kinase VII.1 [Tarenaya hassleriana]
6 Hb_000780_160 0.1262982246 - - hypothetical protein RCOM_0483300 [Ricinus communis]
7 Hb_006358_030 0.1271595949 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
8 Hb_006243_010 0.1284317638 - - PREDICTED: cell wall protein IFF6 [Populus euphratica]
9 Hb_000230_250 0.1457498521 - - PREDICTED: pyruvate, phosphate dikinase, chloroplastic [Jatropha curcas]
10 Hb_132259_010 0.148320608 - - PREDICTED: WAT1-related protein At5g64700 [Jatropha curcas]
11 Hb_000039_120 0.153678295 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
12 Hb_000112_040 0.1594736048 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
13 Hb_010175_050 0.1612235779 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
14 Hb_115114_010 0.1622385475 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002030_100 0.1656343649 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]
16 Hb_002211_020 0.1696010081 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 5-like [Jatropha curcas]
17 Hb_152414_010 0.1703881299 desease resistance Gene Name: NB-ARC hypothetical protein PRUPE_ppa024232mg [Prunus persica]
18 Hb_004880_120 0.1711388092 - - PREDICTED: calcium-binding protein PBP1 [Jatropha curcas]
19 Hb_004007_210 0.1726956691 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
20 Hb_002871_170 0.172762122 transcription factor TF Family: NAC NAC domain-containing protein 21/22, putative [Ricinus communis]

Gene co-expression network

sample Hb_005240_010 Hb_005240_010 Hb_005772_020 Hb_005772_020 Hb_005240_010--Hb_005772_020 Hb_000032_590 Hb_000032_590 Hb_005240_010--Hb_000032_590 Hb_171900_110 Hb_171900_110 Hb_005240_010--Hb_171900_110 Hb_004126_050 Hb_004126_050 Hb_005240_010--Hb_004126_050 Hb_000780_160 Hb_000780_160 Hb_005240_010--Hb_000780_160 Hb_006358_030 Hb_006358_030 Hb_005240_010--Hb_006358_030 Hb_005772_020--Hb_000032_590 Hb_005772_020--Hb_006358_030 Hb_010175_050 Hb_010175_050 Hb_005772_020--Hb_010175_050 Hb_005772_020--Hb_171900_110 Hb_000230_250 Hb_000230_250 Hb_005772_020--Hb_000230_250 Hb_000032_590--Hb_171900_110 Hb_000032_590--Hb_006358_030 Hb_115114_010 Hb_115114_010 Hb_000032_590--Hb_115114_010 Hb_132259_010 Hb_132259_010 Hb_000032_590--Hb_132259_010 Hb_171900_110--Hb_000780_160 Hb_000112_040 Hb_000112_040 Hb_171900_110--Hb_000112_040 Hb_000039_120 Hb_000039_120 Hb_171900_110--Hb_000039_120 Hb_171900_110--Hb_004126_050 Hb_006243_010 Hb_006243_010 Hb_004126_050--Hb_006243_010 Hb_004126_050--Hb_000780_160 Hb_005337_140 Hb_005337_140 Hb_004126_050--Hb_005337_140 Hb_000061_440 Hb_000061_440 Hb_004126_050--Hb_000061_440 Hb_000780_160--Hb_006243_010 Hb_000780_160--Hb_000039_120 Hb_000780_160--Hb_000032_590 Hb_019863_050 Hb_019863_050 Hb_000780_160--Hb_019863_050 Hb_036492_020 Hb_036492_020 Hb_006358_030--Hb_036492_020 Hb_002030_100 Hb_002030_100 Hb_006358_030--Hb_002030_100 Hb_152414_010 Hb_152414_010 Hb_006358_030--Hb_152414_010 Hb_004879_030 Hb_004879_030 Hb_006358_030--Hb_004879_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.2249 0.915549 0.491354 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 2.13818

CAGE analysis