Hb_000112_040

Information

Type -
Description -
Location Contig112: 191241-198409
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_002531725.1
description leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
swissprot
ID C0LGQ5
description LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000112_040 0.0 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
2 Hb_000331_220 0.072192572 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002871_170 0.0811956937 transcription factor TF Family: NAC NAC domain-containing protein 21/22, putative [Ricinus communis]
4 Hb_171900_110 0.1043413393 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT3-like [Populus euphratica]
5 Hb_000049_290 0.1204431683 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 1 [Jatropha curcas]
6 Hb_071130_020 0.125309927 - - -
7 Hb_000032_590 0.13530976 - - PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Jatropha curcas]
8 Hb_022487_010 0.1354909794 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
9 Hb_004994_200 0.1376507164 - - PREDICTED: uncharacterized protein LOC105174340 [Sesamum indicum]
10 Hb_000363_050 0.138416249 - - PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform X2 [Jatropha curcas]
11 Hb_002818_070 0.1401637367 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
12 Hb_064293_010 0.1410893799 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
13 Hb_000313_100 0.1417839422 rubber biosynthesis Gene Name: CPT4 PREDICTED: rubber cis-polyprenyltransferase HRT2 [Jatropha curcas]
14 Hb_004324_220 0.1421487736 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
15 Hb_002211_020 0.146184465 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 5-like [Jatropha curcas]
16 Hb_000039_120 0.1466792942 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
17 Hb_010055_020 0.1504943496 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
18 Hb_005054_320 0.1511422317 - - PREDICTED: uncharacterized protein LOC105646518 [Jatropha curcas]
19 Hb_000780_160 0.1546877828 - - hypothetical protein RCOM_0483300 [Ricinus communis]
20 Hb_044624_010 0.1551191953 - - -

Gene co-expression network

sample Hb_000112_040 Hb_000112_040 Hb_000331_220 Hb_000331_220 Hb_000112_040--Hb_000331_220 Hb_002871_170 Hb_002871_170 Hb_000112_040--Hb_002871_170 Hb_171900_110 Hb_171900_110 Hb_000112_040--Hb_171900_110 Hb_000049_290 Hb_000049_290 Hb_000112_040--Hb_000049_290 Hb_071130_020 Hb_071130_020 Hb_000112_040--Hb_071130_020 Hb_000032_590 Hb_000032_590 Hb_000112_040--Hb_000032_590 Hb_000331_220--Hb_071130_020 Hb_002818_070 Hb_002818_070 Hb_000331_220--Hb_002818_070 Hb_001836_010 Hb_001836_010 Hb_000331_220--Hb_001836_010 Hb_064293_010 Hb_064293_010 Hb_000331_220--Hb_064293_010 Hb_004994_200 Hb_004994_200 Hb_000331_220--Hb_004994_200 Hb_034013_010 Hb_034013_010 Hb_002871_170--Hb_034013_010 Hb_002871_170--Hb_171900_110 Hb_001989_080 Hb_001989_080 Hb_002871_170--Hb_001989_080 Hb_107552_020 Hb_107552_020 Hb_002871_170--Hb_107552_020 Hb_010055_020 Hb_010055_020 Hb_002871_170--Hb_010055_020 Hb_171900_110--Hb_000032_590 Hb_005240_010 Hb_005240_010 Hb_171900_110--Hb_005240_010 Hb_000780_160 Hb_000780_160 Hb_171900_110--Hb_000780_160 Hb_000039_120 Hb_000039_120 Hb_171900_110--Hb_000039_120 Hb_004126_050 Hb_004126_050 Hb_171900_110--Hb_004126_050 Hb_022487_010 Hb_022487_010 Hb_000049_290--Hb_022487_010 Hb_004324_220 Hb_004324_220 Hb_000049_290--Hb_004324_220 Hb_000363_050 Hb_000363_050 Hb_000049_290--Hb_000363_050 Hb_000140_220 Hb_000140_220 Hb_000049_290--Hb_000140_220 Hb_000049_290--Hb_064293_010 Hb_000049_290--Hb_000331_220 Hb_000680_020 Hb_000680_020 Hb_071130_020--Hb_000680_020 Hb_001856_110 Hb_001856_110 Hb_071130_020--Hb_001856_110 Hb_071130_020--Hb_002818_070 Hb_000009_390 Hb_000009_390 Hb_071130_020--Hb_000009_390 Hb_003683_200 Hb_003683_200 Hb_071130_020--Hb_003683_200 Hb_006358_030 Hb_006358_030 Hb_000032_590--Hb_006358_030 Hb_000032_590--Hb_005240_010 Hb_005772_020 Hb_005772_020 Hb_000032_590--Hb_005772_020 Hb_115114_010 Hb_115114_010 Hb_000032_590--Hb_115114_010 Hb_132259_010 Hb_132259_010 Hb_000032_590--Hb_132259_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.539923 0.212981 0.10226 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0717096 0.531494

CAGE analysis