Hb_034013_010

Information

Type -
Description -
Location Contig34013: 8789-14408
Sequence    

Annotation

kegg
ID rcu:RCOM_0558670
description hypothetical protein
nr
ID KDP21473.1
description hypothetical protein JCGZ_21944 [Jatropha curcas]
swissprot
ID O49696
description Aluminum-activated malate transporter 12 OS=Arabidopsis thaliana GN=ALMT12 PE=2 SV=1
trembl
ID A0A067JFA7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21944 PE=4 SV=1
Gene Ontology
ID GO:0015743
description aluminum-activated malate transporter 8-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034013_010 0.0 - - hypothetical protein JCGZ_21944 [Jatropha curcas]
2 Hb_002871_170 0.1201212892 transcription factor TF Family: NAC NAC domain-containing protein 21/22, putative [Ricinus communis]
3 Hb_004884_210 0.1372274375 - - PREDICTED: mitoferrin-like [Jatropha curcas]
4 Hb_010055_020 0.1417479731 - - PREDICTED: receptor-like protein kinase [Jatropha curcas]
5 Hb_000002_090 0.1532504583 - - PREDICTED: RING-H2 finger protein ATL8-like isoform X2 [Jatropha curcas]
6 Hb_001989_080 0.1613984094 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_000112_040 0.1657733527 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
8 Hb_001205_170 0.1669021309 - - PREDICTED: uncharacterized protein LOC105633940 isoform X1 [Jatropha curcas]
9 Hb_171900_110 0.1695238054 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT3-like [Populus euphratica]
10 Hb_000574_090 0.1711758551 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
11 Hb_004007_210 0.1733804823 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
12 Hb_000039_120 0.1746467828 - - PREDICTED: equilibrative nucleotide transporter 3-like [Jatropha curcas]
13 Hb_001999_050 0.1753871726 rubber biosynthesis Gene Name: CPT7 PREDICTED: dehydrodolichyl diphosphate synthase 2 [Jatropha curcas]
14 Hb_172426_010 0.1766256846 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
15 Hb_000363_050 0.1792137287 - - PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform X2 [Jatropha curcas]
16 Hb_019026_040 0.1808649736 - - S-locus lectin protein kinase family protein [Theobroma cacao]
17 Hb_000243_310 0.1810608448 - - lactoylglutathione lyase, putative [Ricinus communis]
18 Hb_000044_050 0.1817662868 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
19 Hb_004143_140 0.1846675182 - - glycosyltransferase, partial [Arabidopsis thaliana]
20 Hb_107552_020 0.1864047973 - - Ethylene-responsive transcription factor 1B, putative [Ricinus communis]

Gene co-expression network

sample Hb_034013_010 Hb_034013_010 Hb_002871_170 Hb_002871_170 Hb_034013_010--Hb_002871_170 Hb_004884_210 Hb_004884_210 Hb_034013_010--Hb_004884_210 Hb_010055_020 Hb_010055_020 Hb_034013_010--Hb_010055_020 Hb_000002_090 Hb_000002_090 Hb_034013_010--Hb_000002_090 Hb_001989_080 Hb_001989_080 Hb_034013_010--Hb_001989_080 Hb_000112_040 Hb_000112_040 Hb_034013_010--Hb_000112_040 Hb_002871_170--Hb_000112_040 Hb_171900_110 Hb_171900_110 Hb_002871_170--Hb_171900_110 Hb_002871_170--Hb_001989_080 Hb_107552_020 Hb_107552_020 Hb_002871_170--Hb_107552_020 Hb_002871_170--Hb_010055_020 Hb_003106_250 Hb_003106_250 Hb_004884_210--Hb_003106_250 Hb_004884_210--Hb_010055_020 Hb_172426_010 Hb_172426_010 Hb_004884_210--Hb_172426_010 Hb_001205_170 Hb_001205_170 Hb_004884_210--Hb_001205_170 Hb_000363_050 Hb_000363_050 Hb_004884_210--Hb_000363_050 Hb_010055_020--Hb_000363_050 Hb_010055_020--Hb_000002_090 Hb_005054_320 Hb_005054_320 Hb_010055_020--Hb_005054_320 Hb_000002_090--Hb_107552_020 Hb_000002_090--Hb_002871_170 Hb_000002_090--Hb_001989_080 Hb_030370_070 Hb_030370_070 Hb_000002_090--Hb_030370_070 Hb_027474_010 Hb_027474_010 Hb_001989_080--Hb_027474_010 Hb_004143_140 Hb_004143_140 Hb_001989_080--Hb_004143_140 Hb_000044_050 Hb_000044_050 Hb_001989_080--Hb_000044_050 Hb_001046_040 Hb_001046_040 Hb_001989_080--Hb_001046_040 Hb_001989_080--Hb_030370_070 Hb_044624_010 Hb_044624_010 Hb_001989_080--Hb_044624_010 Hb_000331_220 Hb_000331_220 Hb_000112_040--Hb_000331_220 Hb_000112_040--Hb_171900_110 Hb_000049_290 Hb_000049_290 Hb_000112_040--Hb_000049_290 Hb_071130_020 Hb_071130_020 Hb_000112_040--Hb_071130_020 Hb_000032_590 Hb_000032_590 Hb_000112_040--Hb_000032_590
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.13616 0.179553 0.162241 0.0130392 0.0114087
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0296368 0 0 0.0651098 0.781923

CAGE analysis