Hb_001205_170

Information

Type -
Description -
Location Contig1205: 117314-120740
Sequence    

Annotation

kegg
ID rcu:RCOM_0536940
description hypothetical protein
nr
ID XP_012072036.1
description PREDICTED: uncharacterized protein LOC105633940 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L1E1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05186 PE=4 SV=1
Gene Ontology
ID GO:0016021
description sulfite exporter family isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001205_170 0.0 - - PREDICTED: uncharacterized protein LOC105633940 isoform X1 [Jatropha curcas]
2 Hb_001999_050 0.1280427046 rubber biosynthesis Gene Name: CPT7 PREDICTED: dehydrodolichyl diphosphate synthase 2 [Jatropha curcas]
3 Hb_004884_210 0.1500790459 - - PREDICTED: mitoferrin-like [Jatropha curcas]
4 Hb_007575_020 0.1585201759 - - cytochrome P450, putative [Ricinus communis]
5 Hb_172426_010 0.1585836939 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
6 Hb_027337_050 0.1637242712 - - polyprotein [Citrus endogenous pararetrovirus]
7 Hb_034013_010 0.1669021309 - - hypothetical protein JCGZ_21944 [Jatropha curcas]
8 Hb_000311_110 0.1703090552 - - ATP-binding cassette transporter, putative [Ricinus communis]
9 Hb_007507_030 0.1799641282 - - polyprotein [Citrus endogenous pararetrovirus]
10 Hb_006043_030 0.1811932241 - - polyprotein [Citrus endogenous pararetrovirus]
11 Hb_042141_010 0.1822209387 - - -
12 Hb_000574_090 0.1833996063 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
13 Hb_130579_050 0.1834131523 - - hypothetical protein JCGZ_25577 [Jatropha curcas]
14 Hb_003106_250 0.1841640833 - - hypothetical protein POPTR_0008s13520g [Populus trichocarpa]
15 Hb_002871_170 0.1857335485 transcription factor TF Family: NAC NAC domain-containing protein 21/22, putative [Ricinus communis]
16 Hb_045785_010 0.1874136456 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
17 Hb_101778_010 0.1881530422 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
18 Hb_119832_010 0.1909604798 - - -
19 Hb_008225_020 0.1969486429 - - PREDICTED: cytochrome P450 71A26-like [Jatropha curcas]
20 Hb_018105_010 0.2006886473 - - hypothetical protein POPTR_0004s08710g [Populus trichocarpa]

Gene co-expression network

sample Hb_001205_170 Hb_001205_170 Hb_001999_050 Hb_001999_050 Hb_001205_170--Hb_001999_050 Hb_004884_210 Hb_004884_210 Hb_001205_170--Hb_004884_210 Hb_007575_020 Hb_007575_020 Hb_001205_170--Hb_007575_020 Hb_172426_010 Hb_172426_010 Hb_001205_170--Hb_172426_010 Hb_027337_050 Hb_027337_050 Hb_001205_170--Hb_027337_050 Hb_034013_010 Hb_034013_010 Hb_001205_170--Hb_034013_010 Hb_000311_110 Hb_000311_110 Hb_001999_050--Hb_000311_110 Hb_018105_010 Hb_018105_010 Hb_001999_050--Hb_018105_010 Hb_119832_010 Hb_119832_010 Hb_001999_050--Hb_119832_010 Hb_000039_120 Hb_000039_120 Hb_001999_050--Hb_000039_120 Hb_171900_110 Hb_171900_110 Hb_001999_050--Hb_171900_110 Hb_003106_250 Hb_003106_250 Hb_004884_210--Hb_003106_250 Hb_004884_210--Hb_034013_010 Hb_010055_020 Hb_010055_020 Hb_004884_210--Hb_010055_020 Hb_004884_210--Hb_172426_010 Hb_000363_050 Hb_000363_050 Hb_004884_210--Hb_000363_050 Hb_000269_040 Hb_000269_040 Hb_007575_020--Hb_000269_040 Hb_004899_210 Hb_004899_210 Hb_007575_020--Hb_004899_210 Hb_045785_010 Hb_045785_010 Hb_007575_020--Hb_045785_010 Hb_000289_090 Hb_000289_090 Hb_007575_020--Hb_000289_090 Hb_008642_050 Hb_008642_050 Hb_007575_020--Hb_008642_050 Hb_017640_010 Hb_017640_010 Hb_007575_020--Hb_017640_010 Hb_000417_150 Hb_000417_150 Hb_172426_010--Hb_000417_150 Hb_004994_200 Hb_004994_200 Hb_172426_010--Hb_004994_200 Hb_000236_430 Hb_000236_430 Hb_172426_010--Hb_000236_430 Hb_172426_010--Hb_027337_050 Hb_001899_040 Hb_001899_040 Hb_027337_050--Hb_001899_040 Hb_130579_050 Hb_130579_050 Hb_027337_050--Hb_130579_050 Hb_002025_240 Hb_002025_240 Hb_027337_050--Hb_002025_240 Hb_003727_060 Hb_003727_060 Hb_027337_050--Hb_003727_060 Hb_002871_170 Hb_002871_170 Hb_034013_010--Hb_002871_170 Hb_034013_010--Hb_010055_020 Hb_000002_090 Hb_000002_090 Hb_034013_010--Hb_000002_090 Hb_001989_080 Hb_001989_080 Hb_034013_010--Hb_001989_080 Hb_000112_040 Hb_000112_040 Hb_034013_010--Hb_000112_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0138133 1.81838 0.26493 0.0879758 0 0.0138566
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0314706 0 0 0.0988357 2.12306

CAGE analysis