Hb_017640_010

Information

Type -
Description -
Location Contig17640: 5-1284
Sequence    

Annotation

kegg
ID rcu:RCOM_1579700
description receptor serine/threonine kinase, putative (EC:2.7.10.2)
nr
ID KDP29653.1
description hypothetical protein JCGZ_18815 [Jatropha curcas]
swissprot
ID Q3ECH2
description Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2
trembl
ID A0A067K3M4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18815 PE=4 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at1g67000 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017640_010 0.0 - - hypothetical protein JCGZ_18815 [Jatropha curcas]
2 Hb_007575_010 0.1107232373 - - PREDICTED: cytochrome P450 71A1 [Vitis vinifera]
3 Hb_144838_010 0.1183523645 - - hypothetical protein JCGZ_08246 [Jatropha curcas]
4 Hb_000672_130 0.1283666284 - - hypothetical protein POPTR_0010s22870g [Populus trichocarpa]
5 Hb_099878_040 0.1301435981 - - PREDICTED: uncharacterized protein LOC102703670 [Oryza brachyantha]
6 Hb_008680_010 0.1315493737 - - -
7 Hb_004899_210 0.1349382212 - - PREDICTED: respiratory burst oxidase homolog protein E [Jatropha curcas]
8 Hb_003900_040 0.1359587581 - - hypothetical protein [Lotus japonicus]
9 Hb_144027_010 0.1402904761 - - -
10 Hb_001250_030 0.1423522598 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004052_130 0.145413998 - - PREDICTED: cytochrome P450 78A5 [Jatropha curcas]
12 Hb_000975_060 0.1459158021 - - -
13 Hb_007575_020 0.1464138852 - - cytochrome P450, putative [Ricinus communis]
14 Hb_000248_020 0.1479449578 - - PREDICTED: uncharacterized protein LOC104243878 [Nicotiana sylvestris]
15 Hb_003169_040 0.1489128889 - - -
16 Hb_045785_010 0.1532425352 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
17 Hb_000269_040 0.1550592284 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
18 Hb_094694_010 0.1556886752 - - -
19 Hb_002598_030 0.1592109891 - - -
20 Hb_004445_030 0.1601315145 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_017640_010 Hb_017640_010 Hb_007575_010 Hb_007575_010 Hb_017640_010--Hb_007575_010 Hb_144838_010 Hb_144838_010 Hb_017640_010--Hb_144838_010 Hb_000672_130 Hb_000672_130 Hb_017640_010--Hb_000672_130 Hb_099878_040 Hb_099878_040 Hb_017640_010--Hb_099878_040 Hb_008680_010 Hb_008680_010 Hb_017640_010--Hb_008680_010 Hb_004899_210 Hb_004899_210 Hb_017640_010--Hb_004899_210 Hb_007575_010--Hb_144838_010 Hb_001250_030 Hb_001250_030 Hb_007575_010--Hb_001250_030 Hb_000031_200 Hb_000031_200 Hb_007575_010--Hb_000031_200 Hb_003169_040 Hb_003169_040 Hb_007575_010--Hb_003169_040 Hb_004445_030 Hb_004445_030 Hb_007575_010--Hb_004445_030 Hb_002598_030 Hb_002598_030 Hb_144838_010--Hb_002598_030 Hb_144838_010--Hb_000672_130 Hb_147604_010 Hb_147604_010 Hb_144838_010--Hb_147604_010 Hb_144838_010--Hb_001250_030 Hb_001300_090 Hb_001300_090 Hb_000672_130--Hb_001300_090 Hb_004643_020 Hb_004643_020 Hb_000672_130--Hb_004643_020 Hb_029510_060 Hb_029510_060 Hb_000672_130--Hb_029510_060 Hb_006827_010 Hb_006827_010 Hb_000672_130--Hb_006827_010 Hb_000975_060 Hb_000975_060 Hb_099878_040--Hb_000975_060 Hb_000248_020 Hb_000248_020 Hb_099878_040--Hb_000248_020 Hb_094694_010 Hb_094694_010 Hb_099878_040--Hb_094694_010 Hb_159124_010 Hb_159124_010 Hb_099878_040--Hb_159124_010 Hb_047923_030 Hb_047923_030 Hb_099878_040--Hb_047923_030 Hb_134377_070 Hb_134377_070 Hb_099878_040--Hb_134377_070 Hb_004052_130 Hb_004052_130 Hb_008680_010--Hb_004052_130 Hb_008680_010--Hb_004445_030 Hb_008680_010--Hb_144838_010 Hb_008680_010--Hb_002598_030 Hb_032717_090 Hb_032717_090 Hb_008680_010--Hb_032717_090 Hb_003900_040 Hb_003900_040 Hb_004899_210--Hb_003900_040 Hb_144027_010 Hb_144027_010 Hb_004899_210--Hb_144027_010 Hb_007575_020 Hb_007575_020 Hb_004899_210--Hb_007575_020 Hb_004899_210--Hb_001250_030 Hb_008642_050 Hb_008642_050 Hb_004899_210--Hb_008642_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.538919 0.0248619 0.0294168 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0913496 2.026

CAGE analysis