Hb_144838_010

Information

Type -
Description -
Location Contig144838: 758-1276
Sequence    

Annotation

kegg
ID rcu:RCOM_1622420
description cytochrome P450, putative (EC:1.14.13.68)
nr
ID KDP36955.1
description hypothetical protein JCGZ_08246 [Jatropha curcas]
swissprot
ID P24465
description Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=2
trembl
ID A0A067KXF4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08246 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 83b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_144838_010 0.0 - - hypothetical protein JCGZ_08246 [Jatropha curcas]
2 Hb_007575_010 0.0883406939 - - PREDICTED: cytochrome P450 71A1 [Vitis vinifera]
3 Hb_017640_010 0.1183523645 - - hypothetical protein JCGZ_18815 [Jatropha curcas]
4 Hb_002598_030 0.1257546091 - - -
5 Hb_000672_130 0.1283246523 - - hypothetical protein POPTR_0010s22870g [Populus trichocarpa]
6 Hb_147604_010 0.1343160277 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
7 Hb_001250_030 0.137369335 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004445_030 0.1408317298 - - conserved hypothetical protein [Ricinus communis]
9 Hb_008680_010 0.1420653649 - - -
10 Hb_004052_130 0.1426038602 - - PREDICTED: cytochrome P450 78A5 [Jatropha curcas]
11 Hb_000432_020 0.1508198572 desease resistance Gene Name: Tropomyosin_1 PREDICTED: putative disease resistance protein RGA1 isoform X2 [Jatropha curcas]
12 Hb_151401_010 0.1523567211 - - -
13 Hb_000879_260 0.1581960643 - - PREDICTED: F-box/kelch-repeat protein At5g43190 [Jatropha curcas]
14 Hb_003414_040 0.1616369873 - - hypothetical protein VITISV_016691 [Vitis vinifera]
15 Hb_000031_200 0.164834766 - - PREDICTED: trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3-like [Jatropha curcas]
16 Hb_093388_010 0.1668176824 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
17 Hb_003169_040 0.1681916924 - - -
18 Hb_101733_010 0.1688709945 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002553_030 0.1717051551 - - hypothetical protein POPTR_0008s16550g [Populus trichocarpa]
20 Hb_047923_030 0.1724926035 - - hypothetical protein JCGZ_09181 [Jatropha curcas]

Gene co-expression network

sample Hb_144838_010 Hb_144838_010 Hb_007575_010 Hb_007575_010 Hb_144838_010--Hb_007575_010 Hb_017640_010 Hb_017640_010 Hb_144838_010--Hb_017640_010 Hb_002598_030 Hb_002598_030 Hb_144838_010--Hb_002598_030 Hb_000672_130 Hb_000672_130 Hb_144838_010--Hb_000672_130 Hb_147604_010 Hb_147604_010 Hb_144838_010--Hb_147604_010 Hb_001250_030 Hb_001250_030 Hb_144838_010--Hb_001250_030 Hb_007575_010--Hb_017640_010 Hb_007575_010--Hb_001250_030 Hb_000031_200 Hb_000031_200 Hb_007575_010--Hb_000031_200 Hb_003169_040 Hb_003169_040 Hb_007575_010--Hb_003169_040 Hb_004445_030 Hb_004445_030 Hb_007575_010--Hb_004445_030 Hb_017640_010--Hb_000672_130 Hb_099878_040 Hb_099878_040 Hb_017640_010--Hb_099878_040 Hb_008680_010 Hb_008680_010 Hb_017640_010--Hb_008680_010 Hb_004899_210 Hb_004899_210 Hb_017640_010--Hb_004899_210 Hb_002598_030--Hb_147604_010 Hb_001542_010 Hb_001542_010 Hb_002598_030--Hb_001542_010 Hb_002598_030--Hb_001250_030 Hb_000432_020 Hb_000432_020 Hb_002598_030--Hb_000432_020 Hb_002598_030--Hb_008680_010 Hb_001300_090 Hb_001300_090 Hb_000672_130--Hb_001300_090 Hb_004643_020 Hb_004643_020 Hb_000672_130--Hb_004643_020 Hb_029510_060 Hb_029510_060 Hb_000672_130--Hb_029510_060 Hb_006827_010 Hb_006827_010 Hb_000672_130--Hb_006827_010 Hb_147604_010--Hb_001542_010 Hb_147604_010--Hb_000432_020 Hb_147604_010--Hb_001250_030 Hb_147604_010--Hb_004445_030 Hb_093388_010 Hb_093388_010 Hb_001250_030--Hb_093388_010 Hb_001250_030--Hb_029510_060 Hb_023738_010 Hb_023738_010 Hb_001250_030--Hb_023738_010 Hb_003311_020 Hb_003311_020 Hb_001250_030--Hb_003311_020 Hb_003414_040 Hb_003414_040 Hb_001250_030--Hb_003414_040 Hb_001250_030--Hb_000432_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.36995 0.171537 0.320471 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.126325 0.0992499 0 0.699093 15.8984

CAGE analysis