Hb_023738_010

Information

Type -
Description -
Location Contig23738: 15359-17464
Sequence    

Annotation

kegg
ID tcc:TCM_007341
description Concanavalin A-like lectin protein kinase family protein
nr
ID XP_007042795.1
description Concanavalin A-like lectin protein kinase family protein [Theobroma cacao]
swissprot
ID Q9LXA5
description L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1
trembl
ID A0A061E2S2
description Concanavalin A-like lectin protein kinase family protein OS=Theobroma cacao GN=TCM_007341 PE=3 SV=1
Gene Ontology
ID GO:0000166
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023738_010 0.0 - - Concanavalin A-like lectin protein kinase family protein [Theobroma cacao]
2 Hb_029510_060 0.091164889 - - PREDICTED: probable plastidic glucose transporter 3 [Jatropha curcas]
3 Hb_093388_010 0.0974368679 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
4 Hb_004374_090 0.1044322741 transcription factor TF Family: HB PREDICTED: homeobox protein BEL1 homolog [Populus euphratica]
5 Hb_001250_030 0.1149435567 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003302_010 0.1176608137 - - PREDICTED: alpha-dioxygenase 1 [Jatropha curcas]
7 Hb_000441_080 0.1291510648 - - calmodulin binding protein, putative [Ricinus communis]
8 Hb_168319_040 0.1343553468 - - PREDICTED: cytochrome P450 CYP749A22-like [Jatropha curcas]
9 Hb_003414_040 0.1344127892 - - hypothetical protein VITISV_016691 [Vitis vinifera]
10 Hb_000512_050 0.1420638419 - - hypothetical protein VITISV_005640 [Vitis vinifera]
11 Hb_001383_080 0.1437368905 - - OSJNBa0019D11.8 [Oryza sativa Japonica Group]
12 Hb_005678_030 0.1440400996 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
13 Hb_004899_210 0.1511408793 - - PREDICTED: respiratory burst oxidase homolog protein E [Jatropha curcas]
14 Hb_007201_010 0.1536800917 - - PREDICTED: uncharacterized protein LOC105631226 isoform X2 [Jatropha curcas]
15 Hb_001793_040 0.1561852744 - - hypothetical protein VITISV_006810 [Vitis vinifera]
16 Hb_011649_030 0.1562548021 - - hypothetical protein [Vitis hybrid cultivar]
17 Hb_005623_060 0.1564070259 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
18 Hb_012796_030 0.1567085426 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
19 Hb_000139_030 0.1571540704 - - PREDICTED: uncharacterized protein LOC101254423 [Solanum lycopersicum]
20 Hb_003900_040 0.1593209536 - - hypothetical protein [Lotus japonicus]

Gene co-expression network

sample Hb_023738_010 Hb_023738_010 Hb_029510_060 Hb_029510_060 Hb_023738_010--Hb_029510_060 Hb_093388_010 Hb_093388_010 Hb_023738_010--Hb_093388_010 Hb_004374_090 Hb_004374_090 Hb_023738_010--Hb_004374_090 Hb_001250_030 Hb_001250_030 Hb_023738_010--Hb_001250_030 Hb_003302_010 Hb_003302_010 Hb_023738_010--Hb_003302_010 Hb_000441_080 Hb_000441_080 Hb_023738_010--Hb_000441_080 Hb_029510_060--Hb_093388_010 Hb_119832_010 Hb_119832_010 Hb_029510_060--Hb_119832_010 Hb_029510_060--Hb_001250_030 Hb_000951_070 Hb_000951_070 Hb_029510_060--Hb_000951_070 Hb_003796_010 Hb_003796_010 Hb_029510_060--Hb_003796_010 Hb_093388_010--Hb_001250_030 Hb_000432_020 Hb_000432_020 Hb_093388_010--Hb_000432_020 Hb_003414_040 Hb_003414_040 Hb_093388_010--Hb_003414_040 Hb_005678_030 Hb_005678_030 Hb_093388_010--Hb_005678_030 Hb_007201_010 Hb_007201_010 Hb_004374_090--Hb_007201_010 Hb_168319_040 Hb_168319_040 Hb_004374_090--Hb_168319_040 Hb_034168_010 Hb_034168_010 Hb_004374_090--Hb_034168_010 Hb_004374_090--Hb_093388_010 Hb_004374_090--Hb_005678_030 Hb_003311_020 Hb_003311_020 Hb_001250_030--Hb_003311_020 Hb_001250_030--Hb_003414_040 Hb_001250_030--Hb_000432_020 Hb_080033_020 Hb_080033_020 Hb_003302_010--Hb_080033_020 Hb_144045_010 Hb_144045_010 Hb_003302_010--Hb_144045_010 Hb_000512_050 Hb_000512_050 Hb_003302_010--Hb_000512_050 Hb_005092_090 Hb_005092_090 Hb_003302_010--Hb_005092_090 Hb_000060_130 Hb_000060_130 Hb_003302_010--Hb_000060_130 Hb_002111_010 Hb_002111_010 Hb_000441_080--Hb_002111_010 Hb_077151_010 Hb_077151_010 Hb_000441_080--Hb_077151_010 Hb_000441_080--Hb_168319_040 Hb_000139_030 Hb_000139_030 Hb_000441_080--Hb_000139_030 Hb_000011_440 Hb_000011_440 Hb_000441_080--Hb_000011_440 Hb_000081_110 Hb_000081_110 Hb_000441_080--Hb_000081_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.399711 0.282487 0.125542 0 0.00897131
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.160064 2.4493

CAGE analysis