Hb_000951_070

Information

Type -
Description -
Location Contig951: 147796-152167
Sequence    

Annotation

kegg
ID pop:POPTR_0221s00210g
description Pto-like kinase OGw family protein
nr
ID XP_011009734.1
description PREDICTED: LOW QUALITY PROTEIN: receptor-like protein kinase FERONIA [Populus euphratica]
swissprot
ID Q9SCZ4
description Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1
trembl
ID U7E0A6
description Pto-like kinase OGw family protein OS=Populus trichocarpa GN=POPTR_0221s00210g PE=3 SV=1
Gene Ontology
ID GO:0004672
description receptor-like protein kinase feronia

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000951_070 0.0 - - PREDICTED: LOW QUALITY PROTEIN: receptor-like protein kinase FERONIA [Populus euphratica]
2 Hb_010402_040 0.0837763254 - - hypothetical protein JCGZ_21227 [Jatropha curcas]
3 Hb_000668_180 0.0972400182 - - hypothetical protein POPTR_0005s16490g [Populus trichocarpa]
4 Hb_089305_040 0.1010113311 - - -
5 Hb_003796_010 0.1040539112 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
6 Hb_003440_080 0.1083139098 - - polyprotein [Citrus endogenous pararetrovirus]
7 Hb_004117_320 0.1127351876 - - PREDICTED: probable serine/threonine-protein kinase WNK5 [Jatropha curcas]
8 Hb_057880_020 0.1137938879 - - PREDICTED: receptor-like protein kinase HSL1, partial [Jatropha curcas]
9 Hb_004979_080 0.1171117796 - - kinase, putative [Ricinus communis]
10 Hb_119832_010 0.1198592428 - - -
11 Hb_020367_040 0.120804664 - - hypothetical protein JCGZ_01061 [Jatropha curcas]
12 Hb_029510_060 0.1208585172 - - PREDICTED: probable plastidic glucose transporter 3 [Jatropha curcas]
13 Hb_002226_090 0.1208587823 - - Stachyose synthase precursor, putative [Ricinus communis]
14 Hb_005867_050 0.1227915291 - - PREDICTED: protein ECERIFERUM 1 [Jatropha curcas]
15 Hb_009393_110 0.1258626646 - - PREDICTED: circadian locomoter output cycles protein kaput [Jatropha curcas]
16 Hb_066293_010 0.133810179 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
17 Hb_004951_030 0.137122089 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
18 Hb_001459_020 0.1412004802 - - ankyrin repeat protein [Bruguiera gymnorhiza]
19 Hb_004291_050 0.1461621805 - - hypothetical protein POPTR_0018s09540g [Populus trichocarpa]
20 Hb_000311_110 0.1479174259 - - ATP-binding cassette transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_000951_070 Hb_000951_070 Hb_010402_040 Hb_010402_040 Hb_000951_070--Hb_010402_040 Hb_000668_180 Hb_000668_180 Hb_000951_070--Hb_000668_180 Hb_089305_040 Hb_089305_040 Hb_000951_070--Hb_089305_040 Hb_003796_010 Hb_003796_010 Hb_000951_070--Hb_003796_010 Hb_003440_080 Hb_003440_080 Hb_000951_070--Hb_003440_080 Hb_004117_320 Hb_004117_320 Hb_000951_070--Hb_004117_320 Hb_010402_040--Hb_004117_320 Hb_002226_090 Hb_002226_090 Hb_010402_040--Hb_002226_090 Hb_005867_050 Hb_005867_050 Hb_010402_040--Hb_005867_050 Hb_020367_040 Hb_020367_040 Hb_010402_040--Hb_020367_040 Hb_010402_040--Hb_000668_180 Hb_033363_030 Hb_033363_030 Hb_000668_180--Hb_033363_030 Hb_000027_110 Hb_000027_110 Hb_000668_180--Hb_000027_110 Hb_004979_080 Hb_004979_080 Hb_000668_180--Hb_004979_080 Hb_031069_040 Hb_031069_040 Hb_000668_180--Hb_031069_040 Hb_089305_040--Hb_003796_010 Hb_004643_020 Hb_004643_020 Hb_089305_040--Hb_004643_020 Hb_001459_020 Hb_001459_020 Hb_089305_040--Hb_001459_020 Hb_009393_110 Hb_009393_110 Hb_089305_040--Hb_009393_110 Hb_004951_030 Hb_004951_030 Hb_089305_040--Hb_004951_030 Hb_003796_010--Hb_004643_020 Hb_003796_010--Hb_004951_030 Hb_003796_010--Hb_009393_110 Hb_119832_010 Hb_119832_010 Hb_003796_010--Hb_119832_010 Hb_000574_340 Hb_000574_340 Hb_003440_080--Hb_000574_340 Hb_012796_030 Hb_012796_030 Hb_003440_080--Hb_012796_030 Hb_000289_090 Hb_000289_090 Hb_003440_080--Hb_000289_090 Hb_003440_080--Hb_119832_010 Hb_027337_130 Hb_027337_130 Hb_003440_080--Hb_027337_130 Hb_004117_320--Hb_005867_050 Hb_004117_320--Hb_002226_090 Hb_022693_080 Hb_022693_080 Hb_004117_320--Hb_022693_080 Hb_004117_320--Hb_004979_080 Hb_004291_050 Hb_004291_050 Hb_004117_320--Hb_004291_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0944535 0.0627574 0.0634312 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00597816 0.383128

CAGE analysis