Hb_027337_130

Information

Type -
Description -
Location Contig27337: 78286-80104
Sequence    

Annotation

kegg
ID rcu:RCOM_0777270
description aldo-keto reductase, putative (EC:2.3.1.170)
nr
ID XP_012072393.1
description PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
swissprot
ID Q9SQ64
description Non-functional NADPH-dependent codeinone reductase 2 OS=Papaver somniferum GN=COR2 PE=1 SV=1
trembl
ID A0A067KTB3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04831 PE=4 SV=1
Gene Ontology
ID GO:0016491
description non-functional nadph-dependent codeinone reductase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28548: 78782-79236 , PASA_asmbl_28549: 79261-79495 , PASA_asmbl_28550: 79506-80071
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027337_130 0.0 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
2 Hb_188075_010 0.0811176388 - - PREDICTED: uncharacterized protein LOC105775124 [Gossypium raimondii]
3 Hb_002636_070 0.0931337159 - - PREDICTED: putative U-box domain-containing protein 42 [Jatropha curcas]
4 Hb_000574_340 0.0962599378 - - hypothetical protein RCOM_0901420 [Ricinus communis]
5 Hb_004291_050 0.0964220742 - - hypothetical protein POPTR_0018s09540g [Populus trichocarpa]
6 Hb_008461_070 0.0974033754 - - PREDICTED: ethylene-overproduction protein 1 isoform X1 [Jatropha curcas]
7 Hb_000033_010 0.1057964346 - - Protein MLO, putative [Ricinus communis]
8 Hb_125961_010 0.1079082583 - - ATP binding protein, putative [Ricinus communis]
9 Hb_000644_010 0.1082483883 - - PREDICTED: putative disease resistance protein RGA1 isoform X2 [Jatropha curcas]
10 Hb_001652_130 0.1096626654 - - hypothetical protein B456_002G193900 [Gossypium raimondii]
11 Hb_004979_080 0.1111793076 - - kinase, putative [Ricinus communis]
12 Hb_000705_040 0.1115395311 - - conserved hypothetical protein [Ricinus communis]
13 Hb_162676_010 0.1116858842 - - ATP binding protein, putative [Ricinus communis]
14 Hb_066293_010 0.1121546608 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
15 Hb_002226_090 0.1136140533 - - Stachyose synthase precursor, putative [Ricinus communis]
16 Hb_000270_640 0.1143734227 - - hypothetical protein POPTR_0012s07880g [Populus trichocarpa]
17 Hb_002943_020 0.1183166215 - - hypothetical protein POPTR_0075s00240g, partial [Populus trichocarpa]
18 Hb_003440_080 0.1187140666 - - polyprotein [Citrus endogenous pararetrovirus]
19 Hb_004934_130 0.1205872747 - - 12-oxophytodienoate reductase 2 isoform 1 [Theobroma cacao]
20 Hb_022693_080 0.1207182016 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Jatropha curcas]

Gene co-expression network

sample Hb_027337_130 Hb_027337_130 Hb_188075_010 Hb_188075_010 Hb_027337_130--Hb_188075_010 Hb_002636_070 Hb_002636_070 Hb_027337_130--Hb_002636_070 Hb_000574_340 Hb_000574_340 Hb_027337_130--Hb_000574_340 Hb_004291_050 Hb_004291_050 Hb_027337_130--Hb_004291_050 Hb_008461_070 Hb_008461_070 Hb_027337_130--Hb_008461_070 Hb_000033_010 Hb_000033_010 Hb_027337_130--Hb_000033_010 Hb_001652_130 Hb_001652_130 Hb_188075_010--Hb_001652_130 Hb_188075_010--Hb_008461_070 Hb_001345_040 Hb_001345_040 Hb_188075_010--Hb_001345_040 Hb_188075_010--Hb_000574_340 Hb_188075_010--Hb_000033_010 Hb_029223_010 Hb_029223_010 Hb_002636_070--Hb_029223_010 Hb_000680_130 Hb_000680_130 Hb_002636_070--Hb_000680_130 Hb_002713_060 Hb_002713_060 Hb_002636_070--Hb_002713_060 Hb_000705_040 Hb_000705_040 Hb_002636_070--Hb_000705_040 Hb_000270_640 Hb_000270_640 Hb_002636_070--Hb_000270_640 Hb_003440_080 Hb_003440_080 Hb_000574_340--Hb_003440_080 Hb_003643_080 Hb_003643_080 Hb_000574_340--Hb_003643_080 Hb_012796_030 Hb_012796_030 Hb_000574_340--Hb_012796_030 Hb_005092_090 Hb_005092_090 Hb_000574_340--Hb_005092_090 Hb_004979_080 Hb_004979_080 Hb_004291_050--Hb_004979_080 Hb_004979_070 Hb_004979_070 Hb_004291_050--Hb_004979_070 Hb_000011_440 Hb_000011_440 Hb_004291_050--Hb_000011_440 Hb_007904_110 Hb_007904_110 Hb_004291_050--Hb_007904_110 Hb_000644_010 Hb_000644_010 Hb_004291_050--Hb_000644_010 Hb_125961_010 Hb_125961_010 Hb_008461_070--Hb_125961_010 Hb_162676_010 Hb_162676_010 Hb_008461_070--Hb_162676_010 Hb_003226_230 Hb_003226_230 Hb_008461_070--Hb_003226_230 Hb_008461_070--Hb_002636_070 Hb_006198_040 Hb_006198_040 Hb_000033_010--Hb_006198_040 Hb_003142_080 Hb_003142_080 Hb_000033_010--Hb_003142_080 Hb_000033_010--Hb_001652_130 Hb_000033_010--Hb_002636_070 Hb_004724_260 Hb_004724_260 Hb_000033_010--Hb_004724_260 Hb_000033_010--Hb_029223_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.228551 26.5482 27.5435 29.9182 0 0.10794
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.236187 0.398159 0.149212 14.4022 115.611

CAGE analysis