Hb_001345_040

Information

Type -
Description -
Location Contig1345: 58657-76598
Sequence    

Annotation

kegg
ID rcu:RCOM_1044930
description cytochrome P450, putative (EC:1.14.13.89)
nr
ID CAN60309.1
description hypothetical protein VITISV_015004 [Vitis vinifera]
swissprot
ID Q6WNQ8
description Cytochrome P450 81E8 OS=Medicago truncatula GN=CYP81E8 PE=2 SV=1
trembl
ID A5AJI9
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015004 PE=4 SV=1
Gene Ontology
ID GO:0005506
description isoflavone 2 -hydroxylase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09762: 57463-58646 , PASA_asmbl_09765: 73948-76476 , PASA_asmbl_09766: 60120-76476
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001345_040 0.0 - - hypothetical protein VITISV_015004 [Vitis vinifera]
2 Hb_006588_020 0.0885529798 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]
3 Hb_188075_010 0.0927527557 - - PREDICTED: uncharacterized protein LOC105775124 [Gossypium raimondii]
4 Hb_005092_090 0.1012646786 - - cold regulated protein [Manihot esculenta]
5 Hb_000352_060 0.104097178 - - RNA-directed DNA polymerase [Arachis hypogaea]
6 Hb_004312_020 0.105157412 - - conserved hypothetical protein [Ricinus communis]
7 Hb_006787_070 0.1125120447 - - PREDICTED: uncharacterized protein LOC104121706, partial [Nicotiana tomentosiformis]
8 Hb_116784_020 0.1158794612 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]
9 Hb_001652_130 0.1193784646 - - hypothetical protein B456_002G193900 [Gossypium raimondii]
10 Hb_000027_230 0.1236165982 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
11 Hb_000732_180 0.1254880651 - - Uncharacterized protein TCM_030007 [Theobroma cacao]
12 Hb_001468_040 0.1273751987 - - Uncharacterized protein TCM_024268 [Theobroma cacao]
13 Hb_027337_130 0.1280765836 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
14 Hb_001300_160 0.128503307 - - PREDICTED: sodium/hydrogen exchanger 2-like [Jatropha curcas]
15 Hb_001366_260 0.1314472369 - - T4.15 [Malus x robusta]
16 Hb_000574_340 0.1336757456 - - hypothetical protein RCOM_0901420 [Ricinus communis]
17 Hb_000820_100 0.1350429176 - - RNA-directed DNA polymerase [Arachis hypogaea]
18 Hb_001514_150 0.1362581326 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
19 Hb_012796_030 0.1378831501 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
20 Hb_007035_010 0.1380989166 - - PREDICTED: synaptotagmin-4 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001345_040 Hb_001345_040 Hb_006588_020 Hb_006588_020 Hb_001345_040--Hb_006588_020 Hb_188075_010 Hb_188075_010 Hb_001345_040--Hb_188075_010 Hb_005092_090 Hb_005092_090 Hb_001345_040--Hb_005092_090 Hb_000352_060 Hb_000352_060 Hb_001345_040--Hb_000352_060 Hb_004312_020 Hb_004312_020 Hb_001345_040--Hb_004312_020 Hb_006787_070 Hb_006787_070 Hb_001345_040--Hb_006787_070 Hb_006588_020--Hb_005092_090 Hb_001866_100 Hb_001866_100 Hb_006588_020--Hb_001866_100 Hb_007035_010 Hb_007035_010 Hb_006588_020--Hb_007035_010 Hb_000049_170 Hb_000049_170 Hb_006588_020--Hb_000049_170 Hb_000009_390 Hb_000009_390 Hb_006588_020--Hb_000009_390 Hb_027337_130 Hb_027337_130 Hb_188075_010--Hb_027337_130 Hb_001652_130 Hb_001652_130 Hb_188075_010--Hb_001652_130 Hb_008461_070 Hb_008461_070 Hb_188075_010--Hb_008461_070 Hb_000574_340 Hb_000574_340 Hb_188075_010--Hb_000574_340 Hb_000033_010 Hb_000033_010 Hb_188075_010--Hb_000033_010 Hb_005092_090--Hb_000574_340 Hb_116784_020 Hb_116784_020 Hb_005092_090--Hb_116784_020 Hb_001366_260 Hb_001366_260 Hb_005092_090--Hb_001366_260 Hb_012796_030 Hb_012796_030 Hb_005092_090--Hb_012796_030 Hb_000352_060--Hb_116784_020 Hb_011649_030 Hb_011649_030 Hb_000352_060--Hb_011649_030 Hb_000173_110 Hb_000173_110 Hb_000352_060--Hb_000173_110 Hb_067472_010 Hb_067472_010 Hb_000352_060--Hb_067472_010 Hb_001468_040 Hb_001468_040 Hb_000352_060--Hb_001468_040 Hb_008834_010 Hb_008834_010 Hb_004312_020--Hb_008834_010 Hb_004312_020--Hb_001366_260 Hb_004312_020--Hb_001468_040 Hb_035651_010 Hb_035651_010 Hb_004312_020--Hb_035651_010 Hb_004312_020--Hb_188075_010 Hb_006787_070--Hb_188075_010 Hb_006787_070--Hb_012796_030 Hb_006787_070--Hb_005092_090 Hb_002798_080 Hb_002798_080 Hb_006787_070--Hb_002798_080 Hb_006787_070--Hb_004312_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0179843 6.31207 5.70393 4.21109 0.263996 0.00350961
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.00910895 0.0286746 0 6.50913 29.0325

CAGE analysis