Hb_000009_390

Information

Type transcription factor
Description TF Family: HB
Location Contig9: 380463-387060
Sequence    

Annotation

kegg
ID pop:POPTR_0007s12170g
description POPTRDRAFT_218986; hypothetical protein
nr
ID XP_012079111.1
description PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]
swissprot
ID Q9SW80
description BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana GN=BLH2 PE=1 SV=3
trembl
ID A0A067KJ17
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12285 PE=4 SV=1
Gene Ontology
ID GO:0005634
description bel1-like homeodomain protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61878: 380505-387220
cDNA
(Sanger)
(ID:Location)		 030_L04.ab1: 380505-381384

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000009_390 0.0 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]
2 Hb_001866_100 0.0709401388 - - PREDICTED: uncharacterized protein LOC104212668 [Nicotiana sylvestris]
3 Hb_002818_070 0.0869531308 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
4 Hb_001856_110 0.0927929655 - - PREDICTED: cellulose synthase-like protein G2 [Populus euphratica]
5 Hb_001836_010 0.0940796719 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [Jatropha curcas]
6 Hb_007035_010 0.0997918403 - - PREDICTED: synaptotagmin-4 isoform X1 [Jatropha curcas]
7 Hb_001514_150 0.0999017775 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
8 Hb_006588_020 0.1061022095 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]
9 Hb_031862_200 0.1091412382 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At3g14460 [Vitis vinifera]
10 Hb_071130_020 0.1122036272 - - -
11 Hb_031949_010 0.1129006411 - - -
12 Hb_003683_200 0.1144590404 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
13 Hb_000101_320 0.1160836171 - - -
14 Hb_003077_140 0.121396965 - - hypothetical protein JCGZ_16294 [Jatropha curcas]
15 Hb_004785_200 0.1233788752 - - PREDICTED: protein MKS1 [Jatropha curcas]
16 Hb_000680_020 0.1240405653 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
17 Hb_001452_090 0.1251563924 - - PREDICTED: serine carboxypeptidase II-3-like [Vitis vinifera]
18 Hb_028872_100 0.1259566022 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
19 Hb_016637_020 0.126308728 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
20 Hb_005092_090 0.1298393556 - - cold regulated protein [Manihot esculenta]

Gene co-expression network

sample Hb_000009_390 Hb_000009_390 Hb_001866_100 Hb_001866_100 Hb_000009_390--Hb_001866_100 Hb_002818_070 Hb_002818_070 Hb_000009_390--Hb_002818_070 Hb_001856_110 Hb_001856_110 Hb_000009_390--Hb_001856_110 Hb_001836_010 Hb_001836_010 Hb_000009_390--Hb_001836_010 Hb_007035_010 Hb_007035_010 Hb_000009_390--Hb_007035_010 Hb_001514_150 Hb_001514_150 Hb_000009_390--Hb_001514_150 Hb_001866_100--Hb_007035_010 Hb_002845_020 Hb_002845_020 Hb_001866_100--Hb_002845_020 Hb_006588_020 Hb_006588_020 Hb_001866_100--Hb_006588_020 Hb_007205_020 Hb_007205_020 Hb_001866_100--Hb_007205_020 Hb_031862_200 Hb_031862_200 Hb_001866_100--Hb_031862_200 Hb_002818_070--Hb_001836_010 Hb_000331_220 Hb_000331_220 Hb_002818_070--Hb_000331_220 Hb_003077_140 Hb_003077_140 Hb_002818_070--Hb_003077_140 Hb_071130_020 Hb_071130_020 Hb_002818_070--Hb_071130_020 Hb_000680_020 Hb_000680_020 Hb_002818_070--Hb_000680_020 Hb_001856_110--Hb_071130_020 Hb_003683_200 Hb_003683_200 Hb_001856_110--Hb_003683_200 Hb_031949_010 Hb_031949_010 Hb_001856_110--Hb_031949_010 Hb_001856_110--Hb_000680_020 Hb_003494_180 Hb_003494_180 Hb_001856_110--Hb_003494_180 Hb_001836_010--Hb_007035_010 Hb_001836_010--Hb_000331_220 Hb_001836_010--Hb_003683_200 Hb_006827_030 Hb_006827_030 Hb_001836_010--Hb_006827_030 Hb_007035_010--Hb_006827_030 Hb_003680_010 Hb_003680_010 Hb_007035_010--Hb_003680_010 Hb_007035_010--Hb_006588_020 Hb_003913_040 Hb_003913_040 Hb_001514_150--Hb_003913_040 Hb_001514_150--Hb_006588_020 Hb_005092_090 Hb_005092_090 Hb_001514_150--Hb_005092_090 Hb_001514_150--Hb_001836_010 Hb_001514_150--Hb_007035_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0488584 28.0966 13.486 8.89436 0.030055 0.0705685
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0179095 0.0140927 0 20.3834 48.9935

CAGE analysis