Hb_003680_010

Information

Type -
Description -
Location Contig3680: 9744-11240
Sequence    

Annotation

kegg
ID rcu:RCOM_1352080
description UDP-glucosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_002519422.1
description UDP-glucosyltransferase, putative [Ricinus communis]
swissprot
ID Q9SCP6
description UDP-glycosyltransferase 73D1 OS=Arabidopsis thaliana GN=UGT73D1 PE=3 SV=1
trembl
ID B9S0A3
description UDP-glucosyltransferase, putative OS=Ricinus communis GN=RCOM_1352080 PE=3 SV=1
Gene Ontology
ID GO:0047213
description udp-glycosyltransferase 73d1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37820: 9398-10037
cDNA
(Sanger)
(ID:Location)		 017_P20.ab1: 9411-10037

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003680_010 0.0 - - UDP-glucosyltransferase, putative [Ricinus communis]
2 Hb_007035_010 0.0867141058 - - PREDICTED: synaptotagmin-4 isoform X1 [Jatropha curcas]
3 Hb_002615_080 0.1017078122 - - PREDICTED: non-specific phospholipase C2 [Jatropha curcas]
4 Hb_004785_200 0.1019293596 - - PREDICTED: protein MKS1 [Jatropha curcas]
5 Hb_031862_200 0.1028597174 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At3g14460 [Vitis vinifera]
6 Hb_006827_030 0.1051513078 - - oligopeptide transporter, putative [Ricinus communis]
7 Hb_001883_010 0.1063513025 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
8 Hb_001836_010 0.1115811629 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [Jatropha curcas]
9 Hb_032695_010 0.1207555627 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Vitis vinifera]
10 Hb_001514_150 0.1208599772 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
11 Hb_031201_010 0.1210275182 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
12 Hb_001866_100 0.1217556533 - - PREDICTED: uncharacterized protein LOC104212668 [Nicotiana sylvestris]
13 Hb_143629_200 0.1235867171 - - hypothetical protein POPTR_0013s00300g [Populus trichocarpa]
14 Hb_007205_020 0.1242120146 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
15 Hb_000025_590 0.1268683331 - - PREDICTED: cytochrome P450 94A1-like isoform X1 [Jatropha curcas]
16 Hb_008494_090 0.1294055542 - - PREDICTED: uncharacterized protein LOC105636007 [Jatropha curcas]
17 Hb_001579_060 0.1303764844 - - carbonic anhydrase, putative [Ricinus communis]
18 Hb_010880_010 0.1339091338 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
19 Hb_000130_480 0.135155877 - - PREDICTED: histone-lysine N-methyltransferase SETD1B [Jatropha curcas]
20 Hb_000009_390 0.1368130419 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_003680_010 Hb_003680_010 Hb_007035_010 Hb_007035_010 Hb_003680_010--Hb_007035_010 Hb_002615_080 Hb_002615_080 Hb_003680_010--Hb_002615_080 Hb_004785_200 Hb_004785_200 Hb_003680_010--Hb_004785_200 Hb_031862_200 Hb_031862_200 Hb_003680_010--Hb_031862_200 Hb_006827_030 Hb_006827_030 Hb_003680_010--Hb_006827_030 Hb_001883_010 Hb_001883_010 Hb_003680_010--Hb_001883_010 Hb_001866_100 Hb_001866_100 Hb_007035_010--Hb_001866_100 Hb_007035_010--Hb_006827_030 Hb_006588_020 Hb_006588_020 Hb_007035_010--Hb_006588_020 Hb_001836_010 Hb_001836_010 Hb_007035_010--Hb_001836_010 Hb_000009_390 Hb_000009_390 Hb_007035_010--Hb_000009_390 Hb_000680_130 Hb_000680_130 Hb_002615_080--Hb_000680_130 Hb_002615_080--Hb_006827_030 Hb_001579_060 Hb_001579_060 Hb_002615_080--Hb_001579_060 Hb_002636_070 Hb_002636_070 Hb_002615_080--Hb_002636_070 Hb_001652_130 Hb_001652_130 Hb_002615_080--Hb_001652_130 Hb_004785_200--Hb_031862_200 Hb_004785_200--Hb_007035_010 Hb_010880_010 Hb_010880_010 Hb_004785_200--Hb_010880_010 Hb_003077_140 Hb_003077_140 Hb_004785_200--Hb_003077_140 Hb_026144_030 Hb_026144_030 Hb_004785_200--Hb_026144_030 Hb_000191_100 Hb_000191_100 Hb_031862_200--Hb_000191_100 Hb_016637_020 Hb_016637_020 Hb_031862_200--Hb_016637_020 Hb_031862_200--Hb_001866_100 Hb_031862_200--Hb_007035_010 Hb_006827_030--Hb_001579_060 Hb_171168_010 Hb_171168_010 Hb_006827_030--Hb_171168_010 Hb_000049_170 Hb_000049_170 Hb_006827_030--Hb_000049_170 Hb_007113_020 Hb_007113_020 Hb_006827_030--Hb_007113_020 Hb_006827_030--Hb_001883_010 Hb_001883_010--Hb_001579_060 Hb_032695_010 Hb_032695_010 Hb_001883_010--Hb_032695_010 Hb_000694_050 Hb_000694_050 Hb_001883_010--Hb_000694_050 Hb_001883_010--Hb_000680_130 Hb_000025_590 Hb_000025_590 Hb_001883_010--Hb_000025_590
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0170825 0.785663 0.722395 0.644242 0 0.0120485
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0313011 0 0 0.727401 1.75145

CAGE analysis