Hb_002615_080

Information

Type -
Description -
Location Contig2615: 81514-86133
Sequence    

Annotation

kegg
ID tcc:TCM_040916
description Non-specific phospholipase C2
nr
ID XP_012065897.1
description PREDICTED: non-specific phospholipase C2 [Jatropha curcas]
swissprot
ID O81020
description Non-specific phospholipase C2 OS=Arabidopsis thaliana GN=NPC2 PE=2 SV=1
trembl
ID A0A067L463
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22783 PE=4 SV=1
Gene Ontology
ID GO:0016788
description non-specific phospholipase c2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27348: 81515-85779 , PASA_asmbl_27349: 82977-83295 , PASA_asmbl_27350: 83348-83624
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002615_080 0.0 - - PREDICTED: non-specific phospholipase C2 [Jatropha curcas]
2 Hb_000680_130 0.0984159227 - - beta-galactosidase, putative [Ricinus communis]
3 Hb_003680_010 0.1017078122 - - UDP-glucosyltransferase, putative [Ricinus communis]
4 Hb_006827_030 0.1021913918 - - oligopeptide transporter, putative [Ricinus communis]
5 Hb_001579_060 0.1057555034 - - carbonic anhydrase, putative [Ricinus communis]
6 Hb_002636_070 0.1076546068 - - PREDICTED: putative U-box domain-containing protein 42 [Jatropha curcas]
7 Hb_001652_130 0.1089598334 - - hypothetical protein B456_002G193900 [Gossypium raimondii]
8 Hb_007035_010 0.1123807319 - - PREDICTED: synaptotagmin-4 isoform X1 [Jatropha curcas]
9 Hb_000270_640 0.11674652 - - hypothetical protein POPTR_0012s07880g [Populus trichocarpa]
10 Hb_000705_040 0.1196063441 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000968_010 0.1204119763 - - PREDICTED: glutamate receptor 3.7 isoform X1 [Jatropha curcas]
12 Hb_001883_010 0.1204155576 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
13 Hb_002155_020 0.120892602 - - PREDICTED: probable WRKY transcription factor 65 [Jatropha curcas]
14 Hb_027337_130 0.1222033712 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
15 Hb_188075_010 0.12333067 - - PREDICTED: uncharacterized protein LOC105775124 [Gossypium raimondii]
16 Hb_006588_020 0.1240630639 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]
17 Hb_001468_040 0.1246672397 - - Uncharacterized protein TCM_024268 [Theobroma cacao]
18 Hb_003142_080 0.1258181362 - - receptor serine/threonine kinase, putative [Ricinus communis]
19 Hb_000033_010 0.1263033492 - - Protein MLO, putative [Ricinus communis]
20 Hb_001836_010 0.1271621148 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [Jatropha curcas]

Gene co-expression network

sample Hb_002615_080 Hb_002615_080 Hb_000680_130 Hb_000680_130 Hb_002615_080--Hb_000680_130 Hb_003680_010 Hb_003680_010 Hb_002615_080--Hb_003680_010 Hb_006827_030 Hb_006827_030 Hb_002615_080--Hb_006827_030 Hb_001579_060 Hb_001579_060 Hb_002615_080--Hb_001579_060 Hb_002636_070 Hb_002636_070 Hb_002615_080--Hb_002636_070 Hb_001652_130 Hb_001652_130 Hb_002615_080--Hb_001652_130 Hb_000373_010 Hb_000373_010 Hb_000680_130--Hb_000373_010 Hb_000705_040 Hb_000705_040 Hb_000680_130--Hb_000705_040 Hb_002155_020 Hb_002155_020 Hb_000680_130--Hb_002155_020 Hb_000680_130--Hb_002636_070 Hb_032695_010 Hb_032695_010 Hb_000680_130--Hb_032695_010 Hb_000680_130--Hb_001579_060 Hb_007035_010 Hb_007035_010 Hb_003680_010--Hb_007035_010 Hb_004785_200 Hb_004785_200 Hb_003680_010--Hb_004785_200 Hb_031862_200 Hb_031862_200 Hb_003680_010--Hb_031862_200 Hb_003680_010--Hb_006827_030 Hb_001883_010 Hb_001883_010 Hb_003680_010--Hb_001883_010 Hb_006827_030--Hb_001579_060 Hb_171168_010 Hb_171168_010 Hb_006827_030--Hb_171168_010 Hb_006827_030--Hb_007035_010 Hb_000049_170 Hb_000049_170 Hb_006827_030--Hb_000049_170 Hb_007113_020 Hb_007113_020 Hb_006827_030--Hb_007113_020 Hb_006827_030--Hb_001883_010 Hb_000694_050 Hb_000694_050 Hb_001579_060--Hb_000694_050 Hb_000987_020 Hb_000987_020 Hb_001579_060--Hb_000987_020 Hb_001579_060--Hb_001883_010 Hb_000968_010 Hb_000968_010 Hb_001579_060--Hb_000968_010 Hb_029223_010 Hb_029223_010 Hb_002636_070--Hb_029223_010 Hb_002713_060 Hb_002713_060 Hb_002636_070--Hb_002713_060 Hb_002636_070--Hb_000705_040 Hb_000270_640 Hb_000270_640 Hb_002636_070--Hb_000270_640 Hb_027337_130 Hb_027337_130 Hb_002636_070--Hb_027337_130 Hb_185474_020 Hb_185474_020 Hb_001652_130--Hb_185474_020 Hb_188075_010 Hb_188075_010 Hb_001652_130--Hb_188075_010 Hb_000033_010 Hb_000033_010 Hb_001652_130--Hb_000033_010 Hb_006198_040 Hb_006198_040 Hb_001652_130--Hb_006198_040 Hb_003142_080 Hb_003142_080 Hb_001652_130--Hb_003142_080 Hb_002943_020 Hb_002943_020 Hb_001652_130--Hb_002943_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.41726 8.87932 12.148 8.53721 0.179631 0.136433
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0990046 0 0 7.3277 29.7619

CAGE analysis