Hb_000033_010

Information

Type -
Description -
Location Contig33: 12874-17502
Sequence    

Annotation

kegg
ID rcu:RCOM_0385650
description Protein MLO, putative
nr
ID XP_002533335.1
description Protein MLO, putative [Ricinus communis]
swissprot
ID O49621
description MLO-like protein 1 OS=Arabidopsis thaliana GN=MLO1 PE=1 SV=1
trembl
ID B9T516
description MLO-like protein (Fragment) OS=Ricinus communis GN=MLO PE=3 SV=1
Gene Ontology
ID GO:0016021
description mlo-like protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000033_010 0.0 - - Protein MLO, putative [Ricinus communis]
2 Hb_006198_040 0.0806145785 - - conserved hypothetical protein [Ricinus communis]
3 Hb_003142_080 0.0886508525 - - receptor serine/threonine kinase, putative [Ricinus communis]
4 Hb_001652_130 0.0895789056 - - hypothetical protein B456_002G193900 [Gossypium raimondii]
5 Hb_002636_070 0.0976336891 - - PREDICTED: putative U-box domain-containing protein 42 [Jatropha curcas]
6 Hb_004724_260 0.0987848889 - - PREDICTED: 40S ribosomal protein S14-2-like [Gossypium raimondii]
7 Hb_029223_010 0.1036904015 - - PREDICTED: ACT domain-containing protein ACR10 [Jatropha curcas]
8 Hb_027337_130 0.1057964346 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Jatropha curcas]
9 Hb_008461_070 0.1068649543 - - PREDICTED: ethylene-overproduction protein 1 isoform X1 [Jatropha curcas]
10 Hb_000130_480 0.1070067756 - - PREDICTED: histone-lysine N-methyltransferase SETD1B [Jatropha curcas]
11 Hb_188075_010 0.1101823508 - - PREDICTED: uncharacterized protein LOC105775124 [Gossypium raimondii]
12 Hb_185474_020 0.113012577 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
13 Hb_046117_030 0.1145935557 - - sialyltransferase, putative [Ricinus communis]
14 Hb_124579_020 0.1165336924 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Jatropha curcas]
15 Hb_000638_100 0.1226327352 - - PREDICTED: histone deacetylase 14 [Jatropha curcas]
16 Hb_000705_040 0.1250398433 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002615_080 0.1263033492 - - PREDICTED: non-specific phospholipase C2 [Jatropha curcas]
18 Hb_002983_090 0.1316482339 - - Altered inheritance of mitochondria protein 32 [Glycine soja]
19 Hb_000116_530 0.1366628688 rubber biosynthesis Gene Name: Hydroxymethylglutaryl coenzyme A reductase RecName: Full=3-hydroxy-3-methylglutaryl-coenzyme A reductase 3; Short=HMG-CoA reductase 3 [Hevea brasiliensis]
20 Hb_000092_060 0.1381701397 - - PREDICTED: uncharacterized protein LOC105646505 [Jatropha curcas]

Gene co-expression network

sample Hb_000033_010 Hb_000033_010 Hb_006198_040 Hb_006198_040 Hb_000033_010--Hb_006198_040 Hb_003142_080 Hb_003142_080 Hb_000033_010--Hb_003142_080 Hb_001652_130 Hb_001652_130 Hb_000033_010--Hb_001652_130 Hb_002636_070 Hb_002636_070 Hb_000033_010--Hb_002636_070 Hb_004724_260 Hb_004724_260 Hb_000033_010--Hb_004724_260 Hb_029223_010 Hb_029223_010 Hb_000033_010--Hb_029223_010 Hb_006198_040--Hb_003142_080 Hb_000130_480 Hb_000130_480 Hb_006198_040--Hb_000130_480 Hb_185474_020 Hb_185474_020 Hb_006198_040--Hb_185474_020 Hb_124579_020 Hb_124579_020 Hb_006198_040--Hb_124579_020 Hb_000836_030 Hb_000836_030 Hb_006198_040--Hb_000836_030 Hb_003142_080--Hb_185474_020 Hb_003142_080--Hb_124579_020 Hb_002635_010 Hb_002635_010 Hb_003142_080--Hb_002635_010 Hb_003142_080--Hb_029223_010 Hb_001652_130--Hb_185474_020 Hb_188075_010 Hb_188075_010 Hb_001652_130--Hb_188075_010 Hb_001652_130--Hb_006198_040 Hb_001652_130--Hb_003142_080 Hb_002943_020 Hb_002943_020 Hb_001652_130--Hb_002943_020 Hb_002636_070--Hb_029223_010 Hb_000680_130 Hb_000680_130 Hb_002636_070--Hb_000680_130 Hb_002713_060 Hb_002713_060 Hb_002636_070--Hb_002713_060 Hb_000705_040 Hb_000705_040 Hb_002636_070--Hb_000705_040 Hb_000270_640 Hb_000270_640 Hb_002636_070--Hb_000270_640 Hb_027337_130 Hb_027337_130 Hb_002636_070--Hb_027337_130 Hb_000638_100 Hb_000638_100 Hb_004724_260--Hb_000638_100 Hb_006915_010 Hb_006915_010 Hb_004724_260--Hb_006915_010 Hb_004724_260--Hb_006198_040 Hb_002122_070 Hb_002122_070 Hb_004724_260--Hb_002122_070 Hb_004724_260--Hb_001652_130 Hb_016924_010 Hb_016924_010 Hb_029223_010--Hb_016924_010 Hb_029223_010--Hb_000705_040 Hb_029223_010--Hb_000270_640 Hb_029223_010--Hb_000836_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0206457 1.9717 2.70899 3.50011 0.010338 0.0389455
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0703993 0.110783 0.104938 2.52045 10.4076

CAGE analysis